Magnesium in PDB 6sz0: The Glucuronoyl Esterase OTCE15A H408A Variant From Opitutus Terrae

The structure of The Glucuronoyl Esterase OTCE15A H408A Variant From Opitutus Terrae, PDB code: 6sz0 was solved by S.Mazurkewich, J.C.Navarro Poulsen, J.Larsbrink, L.Lo Leggio, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.39 / 1.74
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	43.197, 44.204, 50.154, 76.31, 65.70, 70.74
R / Rfree (%)	14.2 / 19.2

The binding sites of Magnesium atom in the The Glucuronoyl Esterase OTCE15A H408A Variant From Opitutus Terrae (pdb code 6sz0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the The Glucuronoyl Esterase OTCE15A H408A Variant From Opitutus Terrae, PDB code: 6sz0:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the The Glucuronoyl Esterase OTCE15A H408A Variant From Opitutus Terrae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Glucuronoyl Esterase OTCE15A H408A Variant From Opitutus Terrae within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:25.3 occ:1.00 O A:HOH760 2.3 22.7 1.0 O A:HIS303 2.3 29.0 1.0 O A:GLU305 2.3 27.1 1.0 O A:HOH654 2.4 28.8 1.0 O A:HOH785 2.4 28.1 1.0 O A:HOH669 2.5 40.0 1.0 H A:HIS303 3.2 33.1 1.0 HB2 A:ASP360 3.4 27.3 1.0 C A:GLU305 3.5 26.5 1.0 C A:HIS303 3.5 28.4 1.0 HB2 A:CYS293 3.6 29.6 1.0 HB3 A:ASP360 3.8 27.3 1.0 HA A:THR306 3.9 27.1 1.0 N A:HIS303 4.0 27.6 1.0 N A:GLU305 4.0 20.7 1.0 H A:GLU305 4.0 24.8 1.0 HB2 A:ALA297 4.0 27.5 1.0 CB A:ASP360 4.0 22.7 1.0 HB3 A:GLU305 4.1 28.7 1.0 C A:GLY304 4.2 27.7 1.0 CA A:GLU305 4.2 21.6 1.0 HA3 A:GLY304 4.3 28.9 1.0 HB3 A:HIS303 4.3 33.6 1.0 CA A:HIS303 4.3 24.3 1.0 HA A:CYS293 4.3 25.0 1.0 O A:LEU298 4.4 29.9 1.0 CB A:CYS293 4.4 24.7 1.0 O A:TRP358 4.5 24.9 1.0 N A:GLY304 4.5 22.7 1.0 OD2 A:ASP360 4.5 23.6 1.0 N A:THR306 4.5 23.2 1.0 HB3 A:ALA297 4.5 27.5 1.0 CA A:GLY304 4.5 24.1 1.0 HG21 A:THR306 4.6 32.4 1.0 HA A:SER299 4.6 27.6 1.0 O A:HOH633 4.6 28.4 1.0 CB A:GLU305 4.7 23.9 1.0 CA A:THR306 4.7 22.6 1.0 CB A:ALA297 4.7 23.0 1.0 O A:GLY304 4.7 24.8 1.0 SG A:CYS293 4.7 27.5 1.0 CG A:ASP360 4.7 28.5 1.0 CA A:CYS293 4.8 20.9 1.0 H A:ILE302 4.8 43.5 1.0 CB A:HIS303 4.9 28.0 1.0 HA A:ILE302 4.9 33.7 1.0 HG A:CYS293 4.9 33.0 1.0

Magnesium binding site 2 out of 2 in the The Glucuronoyl Esterase OTCE15A H408A Variant From Opitutus Terrae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of The Glucuronoyl Esterase OTCE15A H408A Variant From Opitutus Terrae within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:35.7 occ:1.00 O A:HOH746 2.2 29.5 1.0 O A:LEU250 2.5 25.7 1.0 O A:ASP253 2.7 26.9 1.0 O A:VAL256 2.7 29.6 1.0 O A:HOH790 3.2 50.4 1.0 HA A:GLU251 3.2 30.6 1.0 H A:ALA258 3.3 31.4 1.0 HG23 A:VAL256 3.4 38.5 1.0 O A:GLU251 3.4 31.1 1.0 H A:ASP253 3.5 27.4 1.0 C A:GLU251 3.5 30.4 1.0 C A:LEU250 3.6 23.6 1.0 HG21 A:VAL256 3.6 38.5 1.0 HB1 A:ALA258 3.7 29.0 1.0 C A:ASP253 3.7 23.8 1.0 CA A:GLU251 3.7 25.5 1.0 C A:VAL256 3.8 26.6 1.0 HH11 A:ARG132 3.8 0.0 1.0 N A:ASP253 3.8 22.8 1.0 H A:VAL256 3.9 31.2 1.0 HH12 A:ARG132 3.9 0.0 1.0 NH1 A:ARG132 4.0 84.2 1.0 CG2 A:VAL256 4.0 32.1 1.0 HA A:ASP257 4.0 26.7 1.0 N A:ALA258 4.0 26.2 1.0 HB3 A:ALA258 4.0 29.0 1.0 HB3 A:ASP253 4.1 31.8 1.0 N A:GLU251 4.2 24.1 1.0 N A:THR252 4.2 27.5 1.0 HA A:PRO254 4.2 35.0 1.0 CB A:ALA258 4.3 24.1 1.0 CA A:ASP253 4.3 26.6 1.0 HD3 A:ARG132 4.3 50.0 1.0 C A:THR252 4.5 26.3 1.0 N A:ASP257 4.6 24.4 1.0 N A:VAL256 4.6 26.0 1.0 CA A:ASP257 4.6 22.3 1.0 H A:THR252 4.6 33.0 1.0 HG22 A:VAL256 4.6 38.5 1.0 CA A:VAL256 4.6 28.6 1.0 N A:PRO254 4.7 24.3 1.0 CZ A:ARG132 4.7 78.9 1.0 CB A:ASP253 4.7 26.5 1.0 CA A:ALA258 4.8 28.8 1.0 C A:ASP257 4.8 22.6 1.0 O A:HOH678 4.8 50.8 1.0 CA A:PRO254 4.8 29.2 1.0 CA A:THR252 4.8 27.0 1.0 HA A:LEU250 4.9 29.3 1.0 CA A:LEU250 4.9 24.4 1.0 HB3 A:LEU250 4.9 29.6 1.0 CB A:VAL256 4.9 26.4 1.0 HA A:THR252 4.9 32.4 1.0

S.Mazurkewich, J.C.Navarro Poulsen, J.Larsbrink, L.Lo Leggio. The Glucuronoyl Esterase OTCE15A H408A Variant From Opitutus Terrae To Be Published.