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Magnesium in PDB 7c1o: Crystal Structure of Aquifex Aeolicus Era Y63A Bound to Gdp.ALF4-

Protein crystallography data

The structure of Crystal Structure of Aquifex Aeolicus Era Y63A Bound to Gdp.ALF4-, PDB code: 7c1o was solved by S.Batra, B.Prakash, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.52 / 2.18
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 36.377, 72.86, 120.91, 90, 90, 90
R / Rfree (%) 20.5 / 23.6

Other elements in 7c1o:

The structure of Crystal Structure of Aquifex Aeolicus Era Y63A Bound to Gdp.ALF4- also contains other interesting chemical elements:

Fluorine (F) 4 atoms
Potassium (K) 1 atom
Aluminium (Al) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Aquifex Aeolicus Era Y63A Bound to Gdp.ALF4- (pdb code 7c1o). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Aquifex Aeolicus Era Y63A Bound to Gdp.ALF4-, PDB code: 7c1o:

Magnesium binding site 1 out of 1 in 7c1o

Go back to Magnesium Binding Sites List in 7c1o
Magnesium binding site 1 out of 1 in the Crystal Structure of Aquifex Aeolicus Era Y63A Bound to Gdp.ALF4-


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Aquifex Aeolicus Era Y63A Bound to Gdp.ALF4- within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg405

b:33.5
occ:1.00
O3B A:GDP402 2.0 29.2 1.0
O A:HOH551 2.1 32.5 1.0
F4 A:ALF401 2.1 37.9 1.0
OG1 A:THR38 2.2 35.9 1.0
OG A:SER17 2.3 34.4 1.0
O A:HOH513 2.3 30.4 1.0
CB A:THR38 3.2 33.2 1.0
CB A:SER17 3.3 33.2 1.0
PB A:GDP402 3.3 30.9 1.0
AL A:ALF401 3.5 41.0 1.0
F1 A:ALF401 3.7 37.3 1.0
O1B A:GDP402 3.7 30.0 1.0
N A:SER17 3.8 29.3 1.0
OD2 A:ASP58 4.0 35.3 1.0
N A:THR38 4.1 34.5 1.0
F2 A:ALF401 4.1 34.1 1.0
O A:HOH503 4.1 34.3 1.0
CA A:SER17 4.1 31.9 1.0
CG2 A:THR38 4.2 32.4 1.0
OD1 A:ASP58 4.2 34.5 1.0
O1A A:GDP402 4.2 31.8 1.0
CA A:THR38 4.2 37.5 1.0
O3A A:GDP402 4.3 34.2 1.0
PA A:GDP402 4.3 34.0 1.0
O2B A:GDP402 4.4 30.9 1.0
O A:ILE30 4.4 35.3 1.0
CG A:ASP58 4.6 34.4 1.0
OG A:SER29 4.7 41.7 1.0
O A:HOH545 4.8 32.8 1.0
O2A A:GDP402 4.8 33.7 1.0
O A:THR59 4.8 31.7 1.0
CB A:LYS16 4.8 26.8 1.0
C A:LYS16 4.9 32.3 1.0
CE A:LYS16 5.0 28.5 1.0

Reference:

S.Batra, B.Prakash. Crystal Structure of Aquifex Aeolicus Era Y63A Bound to Gdp.ALF4- To Be Published.
Page generated: Wed Oct 2 13:38:30 2024

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