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Magnesium in PDB 7khb: Escherichia Coli Rna Polymerase and RRNBP1 Promoter Open Complex

Enzymatic activity of Escherichia Coli Rna Polymerase and RRNBP1 Promoter Open Complex

All present enzymatic activity of Escherichia Coli Rna Polymerase and RRNBP1 Promoter Open Complex:
2.7.7.6;

Other elements in 7khb:

The structure of Escherichia Coli Rna Polymerase and RRNBP1 Promoter Open Complex also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Escherichia Coli Rna Polymerase and RRNBP1 Promoter Open Complex (pdb code 7khb). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Escherichia Coli Rna Polymerase and RRNBP1 Promoter Open Complex, PDB code: 7khb:

Magnesium binding site 1 out of 1 in 7khb

Go back to Magnesium Binding Sites List in 7khb
Magnesium binding site 1 out of 1 in the Escherichia Coli Rna Polymerase and RRNBP1 Promoter Open Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Escherichia Coli Rna Polymerase and RRNBP1 Promoter Open Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg2001

b:31.8
occ:1.00
OD1 D:ASP462 2.2 33.4 1.0
OD1 D:ASP464 2.3 35.5 1.0
OD2 D:ASP462 2.8 33.4 1.0
CG D:ASP462 2.8 33.4 1.0
OD2 D:ASP464 2.9 35.5 1.0
CG D:ASP464 2.9 35.5 1.0
CB D:ASP460 3.0 36.8 1.0
O D:ASP460 3.7 36.8 1.0
OD1 D:ASP460 3.9 36.8 1.0
CG D:ASP460 3.9 36.8 1.0
CA D:ASP460 3.9 36.8 1.0
C D:ASP460 4.0 36.8 1.0
N D:ASP460 4.2 36.8 1.0
CB D:ASP462 4.3 33.4 1.0
CB D:ASP464 4.3 35.5 1.0
N D:ASP462 4.5 33.4 1.0
CA D:ASP462 4.8 33.4 1.0
O D:ASP462 4.9 33.4 1.0
N D:ASP464 4.9 35.5 1.0
C D:ASP462 5.0 33.4 1.0
N D:PHE461 5.0 34.3 1.0

Reference:

Y.Shin, M.Z.Qayyum, K.S.Murakami. Escherichia Coli Rna Polymerase and RRNBP1 Promoter Open Complex To Be Published.
Page generated: Thu Aug 14 08:13:13 2025

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