Magnesium in PDB 7svw: Strand-Transfer Complex of Tnsb From Shcast

The binding sites of Magnesium atom in the Strand-Transfer Complex of Tnsb From Shcast (pdb code 7svw). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Strand-Transfer Complex of Tnsb From Shcast, PDB code: 7svw:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Strand-Transfer Complex of Tnsb From Shcast


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Strand-Transfer Complex of Tnsb From Shcast within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg600 b:50.0 occ:1.00 O3' 6:DA20 1.9 10.3 1.0 OD2 B:ASP287 2.6 54.8 1.0 OD1 B:ASP205 2.6 54.8 1.0 C3' 6:DA20 2.7 10.3 1.0 CG B:ASP205 3.5 54.8 1.0 C4' 6:DA20 3.5 10.3 1.0 CG B:ASP287 3.6 54.8 1.0 OD2 B:ASP205 3.6 54.8 1.0 CB B:ASP287 3.7 54.8 1.0 OP2 1:DG0 3.8 5.9 1.0 C2' 6:DA20 4.0 10.3 1.0 C5' 6:DA20 4.3 10.3 1.0 O4' 6:DA20 4.7 10.3 1.0 OD1 B:ASP287 4.7 54.8 1.0 C5' 1:DG0 4.8 5.9 1.0 N B:HIS206 4.8 54.8 1.0 NH2 B:ARG311 4.8 54.8 1.0 C1' 6:DA20 4.8 10.3 1.0 CB B:ASP205 4.9 54.8 1.0 O B:HIS206 5.0 54.8 1.0 P 1:DG0 5.0 5.9 1.0

Magnesium binding site 2 out of 2 in the Strand-Transfer Complex of Tnsb From Shcast


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Strand-Transfer Complex of Tnsb From Shcast within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg600 b:50.0 occ:1.00 O3' 3:DA20 2.1 10.7 1.0 OD2 D:ASP287 2.6 54.8 1.0 OD1 D:ASP205 2.6 54.8 1.0 C3' 3:DA20 2.8 10.7 1.0 CG D:ASP205 3.5 54.8 1.0 CG D:ASP287 3.6 54.8 1.0 C4' 3:DA20 3.6 10.7 1.0 OD2 D:ASP205 3.6 54.8 1.0 CB D:ASP287 3.7 54.8 1.0 OP2 4:DG0 4.0 5.9 1.0 C2' 3:DA20 4.2 10.7 1.0 C5' 3:DA20 4.3 10.7 1.0 OD1 D:ASP287 4.7 54.8 1.0 N D:HIS206 4.8 54.8 1.0 NH2 D:ARG311 4.8 54.8 1.0 O4' 3:DA20 4.8 10.7 1.0 CB D:ASP205 4.9 54.8 1.0 C5' 4:DG0 4.9 5.9 1.0 C1' 3:DA20 5.0 10.7 1.0 O D:HIS206 5.0 54.8 1.0

J.U.Park, A.W.Tsai, T.H.Chen, J.E.Peters, E.H.Kellogg. Mechanistic Details of Crispr-Associated Transposon Recruitment and Integration Revealed By Cryo-Em. Proc.Natl.Acad.Sci.Usa V. 119 90119 2022.
ISSN: ESSN 1091-6490
PubMed: 35914146
DOI: 10.1073/PNAS.2202590119