Magnesium in PDB 7z1n: Structure of Yeast Rna Polymerase III Delta C53-C37-C11

All present enzymatic activity of Structure of Yeast Rna Polymerase III Delta C53-C37-C11:
2.7.7.6;

The structure of Structure of Yeast Rna Polymerase III Delta C53-C37-C11 also contains other interesting chemical elements:

Zinc

(Zn)

5 atoms

The binding sites of Magnesium atom in the Structure of Yeast Rna Polymerase III Delta C53-C37-C11 (pdb code 7z1n). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Yeast Rna Polymerase III Delta C53-C37-C11, PDB code: 7z1n:

Magnesium binding site 1 out of 1 in the Structure of Yeast Rna Polymerase III Delta C53-C37-C11


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Yeast Rna Polymerase III Delta C53-C37-C11 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg2002 b:27.8 occ:1.00 OD2 A:ASP511 2.0 24.4 1.0 O3' R:G19 2.0 40.9 1.0 CG A:ASP511 2.8 24.4 1.0 C3' R:G19 3.2 40.9 1.0 OD1 A:ASP511 3.2 24.4 1.0 CB A:ASP513 3.4 24.7 1.0 C4' R:G19 3.8 40.9 1.0 C5' R:G19 3.9 40.9 1.0 CB A:ASP511 4.0 24.4 1.0 CG A:ASP513 4.1 24.7 1.0 OD1 A:ASP513 4.2 24.7 1.0 O A:ASP511 4.4 24.4 1.0 C2' R:G19 4.5 40.9 1.0 O A:ASP513 4.5 24.7 1.0 O5' R:G19 4.6 40.9 1.0 CA A:ASP513 4.6 24.7 1.0 O2' R:G19 4.7 40.9 1.0 C A:ASP513 4.8 24.7 1.0 N A:ASP513 4.9 24.7 1.0 C A:ASP511 5.0 24.4 1.0

M.Girbig, J.Xie, H.Grotsch, D.Libri, O.Porrua, C.W.Muller. Architecture of the Yeast Pol III Pre-Termination Complex and Pausing Mechanism on Poly(Dt) Termination Signals. Cell Rep V. 40 11316 2022.
ISSN: ESSN 2211-1247
PubMed: 36070694
DOI: 10.1016/J.CELREP.2022.111316