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Magnesium in PDB, part 502 (files: 20041-20080), PDB 7yxl-7z38

Experimental structures of coordination spheres of Magnesium (Mg) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Magnesium atoms. PDB files: 20041-20080 (PDB 7yxl-7z38).
  1. 7yxl (Mg: 2) - Drosophila Melanogaster JMJD7 (DMJMJD7) in Complex with Mn and N- Oxalyl-D-Phenylalanine (Nofd)
    Other atoms: Mn (2);
  2. 7yxm (Mg: 1) - Benzoylsuccinyl-Coa Thiolase with Coenzyme A
    Other atoms: Cl (1); Zn (2);
  3. 7yy3 (Mg: 3) - Crystal Structure of Mycobacterium Abscessus Phosphopantetheine Adenylyltransferase in Complex with Fragment 7
    Other atoms: F (3);
  4. 7yyo (Mg: 8) - Cryo-Em Structure of An A-Carboxysome Rubisco Enzyme at 2.9 A Resolution
  5. 7yyy (Mg: 1) - Molecular Snapshots of Drug Release From Tubulin: 1 Microsecond After Photoactivation
    Other atoms: Ca (1);
  6. 7yyz (Mg: 1) - Molecular Snapshots of Drug Release From Tubulin: 10 Microseconds After Photoactivation.
    Other atoms: Ca (1);
  7. 7yz0 (Mg: 1) - Molecular Snapshots of Drug Release From Tubulin: 100 Microseconds After Photoactivation.
    Other atoms: Ca (1);
  8. 7yz1 (Mg: 1) - Molecular Snapshots of Drug Release From Tubulin: 1 Millisecond After Photoactivation.
    Other atoms: Ca (1);
  9. 7yz2 (Mg: 1) - Molecular Snapshots of Drug Release From Tubulin: 10 Milliseconds After Photoactivation.
  10. 7yz3 (Mg: 1) - Molecular Snapshots of Drug Release From Tubulin: Apo State
    Other atoms: Ca (1);
  11. 7yz5 (Mg: 1) - Molecular Snapshots of Drug Release From Tubulin: 100 Milliseconds (Steady State)
    Other atoms: Ca (1);
  12. 7yz6 (Mg: 2) - Molecular Snapshots of Drug Release From Tubulin: Dark (Steady State)
    Other atoms: Ca (1);
  13. 7yzm (Mg: 4) - Mgadpnp-Bound Dccp:Dccp-R Complex
    Other atoms: Fe (40);
  14. 7yzn (Mg: 1) - Structure of C-Terminally Truncated AIF5B From Pyrococcus Abyssi Complexed with Gtp
    Other atoms: Na (1);
  15. 7yzo (Mg: 2) - Endonuclease State of the E. Coli MRE11-RAD50 (Sbccd) Head Complex Bound to Adp and Dsdna
    Other atoms: Mn (4);
  16. 7yzp (Mg: 2) - Hairpin-Bound State of the E. Coli MRE11-RAD50 (Sbccd) Head Complex Bound to Adp and A Dna Hairpin
    Other atoms: Mn (4);
  17. 7yzq (Mg: 4) - Mgadp-ALF4-Bound Dccp:Dccp-R Complex
    Other atoms: Fe (40); F (16); Al (4);
  18. 7yzr (Mg: 2) - 50 Mm Rb+ Soak of Beryllium Fluoride Inhibited Na+,K+-Atpase, E2-Befx (Rigid Body Model)
    Other atoms: F (6);
  19. 7yzz (Mg: 5) - Crystal Structure of Vibrio Alkaline Phosphatase in 0.5 M Nacl
    Other atoms: Zn (4); Cl (2);
  20. 7z00 (Mg: 2) - Crystal Structure of Vibrio Alkaline Phosphatase in 1.0 M Kbr
    Other atoms: Br (1); Zn (2);
  21. 7z01 (Mg: 1) - Z-SBTUBA4 Photoswitch Bound to Tubulin-Darpin D1 Complex
    Other atoms: Ca (1);
  22. 7z02 (Mg: 2) - Z-SBTUB2M Photoswitch Bound to Tubulin-Darpin D1 Complex
  23. 7z03 (Mg: 2) - Endonuclease State of the E. Coli MRE11-RAD50 (Sbccd) Head Complex Bound to Adp and Extended Dsdna
    Other atoms: Mn (4);
  24. 7z04 (Mg: 2) - 10 Mm Rb+ Soak of Beryllium Fluoride Inhibited Na+,K+-Atpase, E2-Befx (Rigid Body Model)
    Other atoms: F (6);
  25. 7z0f (Mg: 1) - Cpap:S-Tubulin:IIH5 Alpharep Complex
  26. 7z0g (Mg: 2) - Cpap:Tubulin:IE5 Alpharep Complex P1 Space Group
  27. 7z0w (Mg: 2) - E. Coli Nfsa Bound to Nadp+
  28. 7z10 (Mg: 1) - Monomeric Respiratory Complex IV Isolated From S. Cerevisiae
    Other atoms: Cu (3); Zn (1); Fe (2);
  29. 7z15 (Mg: 4) - E. Coli C-P Lyase Bound to A Phnk/Phnl Dual Abc Dimer and Adp + Pi
    Other atoms: Zn (4);
  30. 7z16 (Mg: 2) - E. Coli C-P Lyase Bound to Phnk/Phnl Dual Abc Dimer with Amppnp and Phnk E171Q Mutation
    Other atoms: Zn (4);
  31. 7z18 (Mg: 2) - E. Coli C-P Lyase Bound to A Phnk Abc Dimer and Atp
    Other atoms: Zn (4);
  32. 7z1j (Mg: 2) - Escherichia Coli Periplasmic Phytase Appa, Complex with Phosphate
    Other atoms: Ni (1);
  33. 7z1n (Mg: 1) - Structure of Yeast Rna Polymerase III Delta C53-C37-C11
    Other atoms: Zn (5);
  34. 7z2a (Mg: 2) - P. Berghei Kinesin-8B Motor Domain in No Nucleotide State Bound to Tubulin Dimer
  35. 7z2b (Mg: 3) - P. Berghei Kinesin-8B Motor Domain in Amppnp State Bound to Tubulin Dimer
  36. 7z2c (Mg: 2) - P. Falciparum Kinesin-8B Motor Domain in No Nucleotide Bound to Tubulin Dimer
  37. 7z2n (Mg: 5) - Tubulin-18-Complex
    Other atoms: Ca (4);
  38. 7z2p (Mg: 5) - Tubulin-Nocodazole Complex
  39. 7z31 (Mg: 1) - Structure of Yeast Rna Polymerase III-TY1 Integrase Complex at 2.7 A (Focus Subunit C11, No C11 C-Terminal Zn-Ribbon in the Funnel Pore).
    Other atoms: Zn (6);
  40. 7z38 (Mg: 2) - Structure of the RAF1-HSP90-CDC37 Complex (Rhc-I)
Page generated: Tue Aug 26 21:07:32 2025

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