Magnesium in PDB 8bnv: Crystal Structure of PIF1 From Deferribacter Desulfuricans in Apo From

The structure of Crystal Structure of PIF1 From Deferribacter Desulfuricans in Apo From, PDB code: 8bnv was solved by S.Rety, W.F.Chen, X.G.Xi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	37.64 / 2.86
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	88.764, 147.053, 78.368, 90, 90, 90
R / Rfree (%)	20.2 / 24.8

The binding sites of Magnesium atom in the Crystal Structure of PIF1 From Deferribacter Desulfuricans in Apo From (pdb code 8bnv). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of PIF1 From Deferribacter Desulfuricans in Apo From, PDB code: 8bnv:

Magnesium binding site 1 out of 1 in the Crystal Structure of PIF1 From Deferribacter Desulfuricans in Apo From


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of PIF1 From Deferribacter Desulfuricans in Apo From within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg602 b:64.2 occ:1.00 OD1 A:ASP47 2.7 49.0 1.0 OG1 A:THR97 3.1 56.0 1.0 O A:HOH703 3.4 49.6 1.0 CG A:ASP47 3.6 50.2 1.0 CD2 A:LEU45 3.6 35.7 1.0 OD2 A:ASP47 3.7 50.7 1.0 CB A:THR97 3.9 37.4 1.0 CD1 A:LEU45 4.2 37.4 1.0 CG A:LEU45 4.3 40.9 1.0 CB A:LEU45 4.4 39.3 1.0 O A:ASP47 4.6 58.2 1.0 CG2 A:THR97 4.7 34.0 1.0 C A:ASP47 4.9 53.5 1.0 CB A:ALA48 4.9 40.0 1.0 CB A:ASP47 4.9 41.2 1.0 N A:THR97 5.0 40.5 1.0

S.Rety, Y.Zhang, W.Fu, S.Wang, W.F.Chen, X.G.Xi. Structural Studies of PIF1 Helicases From Thermophilic Bacteria. Microorganisms V. 11 2023.
ISSN: ESSN 2076-2607
PubMed: 36838444
DOI: 10.3390/MICROORGANISMS11020479