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Magnesium in PDB 8ccn: Filamentous Actin II From Plasmodium Falciparum

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Filamentous Actin II From Plasmodium Falciparum (pdb code 8ccn). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 6 binding sites of Magnesium where determined in the Filamentous Actin II From Plasmodium Falciparum, PDB code: 8ccn:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6;

Magnesium binding site 1 out of 6 in 8ccn

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Magnesium binding site 1 out of 6 in the Filamentous Actin II From Plasmodium Falciparum


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Filamentous Actin II From Plasmodium Falciparum within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg402

b:28.4
occ:1.00
O3B A:ADP401 2.1 35.9 1.0
OE1 A:GLN137 3.4 44.9 1.0
PB A:ADP401 3.6 35.9 1.0
CD A:GLN137 4.1 44.9 1.0
OD1 A:ASP154 4.2 40.6 1.0
O2B A:ADP401 4.3 35.9 1.0
O1B A:ADP401 4.3 35.9 1.0
O2A A:ADP401 4.4 35.9 1.0
NE2 A:GLN137 4.4 44.9 1.0
CA A:GLY156 4.5 36.9 1.0
O3A A:ADP401 4.5 35.9 1.0
OD2 A:ASP154 4.6 40.6 1.0
OD2 A:ASP11 4.7 44.2 1.0
CG2 A:VAL340 4.8 39.8 1.0
CG A:ASP154 4.8 40.6 1.0

Magnesium binding site 2 out of 6 in 8ccn

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Magnesium binding site 2 out of 6 in the Filamentous Actin II From Plasmodium Falciparum


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Filamentous Actin II From Plasmodium Falciparum within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg402

b:27.0
occ:1.00
O3B B:ADP401 2.1 40.3 1.0
OE1 B:GLN137 3.4 45.7 1.0
PB B:ADP401 3.6 40.3 1.0
CD B:GLN137 4.1 45.7 1.0
OD1 B:ASP154 4.2 35.7 1.0
O2B B:ADP401 4.3 40.3 1.0
O1B B:ADP401 4.3 40.3 1.0
O2A B:ADP401 4.4 40.3 1.0
NE2 B:GLN137 4.4 45.7 1.0
CA B:GLY156 4.5 34.1 1.0
O3A B:ADP401 4.5 40.3 1.0
OD2 B:ASP154 4.6 35.7 1.0
OD2 B:ASP11 4.7 45.0 1.0
CG2 B:VAL340 4.8 38.8 1.0
CG B:ASP154 4.8 35.7 1.0

Magnesium binding site 3 out of 6 in 8ccn

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Magnesium binding site 3 out of 6 in the Filamentous Actin II From Plasmodium Falciparum


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Filamentous Actin II From Plasmodium Falciparum within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg402

b:27.8
occ:1.00
O3B C:ADP401 2.1 31.2 1.0
OE1 C:GLN137 3.4 45.2 1.0
PB C:ADP401 3.6 31.2 1.0
CD C:GLN137 4.1 45.2 1.0
OD1 C:ASP154 4.2 36.5 1.0
O2B C:ADP401 4.3 31.2 1.0
O1B C:ADP401 4.3 31.2 1.0
O2A C:ADP401 4.3 31.2 1.0
NE2 C:GLN137 4.4 45.2 1.0
CA C:GLY156 4.5 34.1 1.0
O3A C:ADP401 4.5 31.2 1.0
OD2 C:ASP154 4.6 36.5 1.0
OD2 C:ASP11 4.7 43.2 1.0
CG2 C:VAL340 4.8 36.8 1.0
CG C:ASP154 4.8 36.5 1.0

Magnesium binding site 4 out of 6 in 8ccn

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Magnesium binding site 4 out of 6 in the Filamentous Actin II From Plasmodium Falciparum


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Filamentous Actin II From Plasmodium Falciparum within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg402

b:28.3
occ:1.00
O3B D:ADP401 2.1 38.5 1.0
OE1 D:GLN137 3.4 44.6 1.0
PB D:ADP401 3.6 38.5 1.0
CD D:GLN137 4.1 44.6 1.0
OD1 D:ASP154 4.2 36.8 1.0
O2B D:ADP401 4.3 38.5 1.0
O1B D:ADP401 4.3 38.5 1.0
O2A D:ADP401 4.4 38.5 1.0
NE2 D:GLN137 4.4 44.6 1.0
CA D:GLY156 4.5 34.3 1.0
O3A D:ADP401 4.5 38.5 1.0
OD2 D:ASP154 4.6 36.8 1.0
OD2 D:ASP11 4.7 45.4 1.0
CG2 D:VAL340 4.8 35.8 1.0
CG D:ASP154 4.8 36.8 1.0

Magnesium binding site 5 out of 6 in 8ccn

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Magnesium binding site 5 out of 6 in the Filamentous Actin II From Plasmodium Falciparum


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Filamentous Actin II From Plasmodium Falciparum within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg402

b:32.3
occ:1.00
O3B E:ADP401 2.1 38.2 1.0
OE1 E:GLN137 3.4 45.4 1.0
PB E:ADP401 3.6 38.2 1.0
CD E:GLN137 4.1 45.4 1.0
OD1 E:ASP154 4.2 37.2 1.0
O2B E:ADP401 4.3 38.2 1.0
O1B E:ADP401 4.3 38.2 1.0
O2A E:ADP401 4.4 38.2 1.0
NE2 E:GLN137 4.4 45.4 1.0
CA E:GLY156 4.5 35.0 1.0
O3A E:ADP401 4.5 38.2 1.0
OD2 E:ASP154 4.6 37.2 1.0
OD2 E:ASP11 4.7 44.9 1.0
CG2 E:VAL340 4.8 37.5 1.0
CG E:ASP154 4.8 37.2 1.0

Magnesium binding site 6 out of 6 in 8ccn

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Magnesium binding site 6 out of 6 in the Filamentous Actin II From Plasmodium Falciparum


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Filamentous Actin II From Plasmodium Falciparum within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Mg402

b:31.0
occ:1.00
O3B F:ADP401 2.1 42.7 1.0
OE1 F:GLN137 3.4 47.1 1.0
PB F:ADP401 3.6 42.7 1.0
CD F:GLN137 4.1 47.1 1.0
OD1 F:ASP154 4.2 39.3 1.0
O2B F:ADP401 4.3 42.7 1.0
O1B F:ADP401 4.3 42.7 1.0
O2A F:ADP401 4.4 42.7 1.0
NE2 F:GLN137 4.4 47.1 1.0
CA F:GLY156 4.5 36.0 1.0
O3A F:ADP401 4.5 42.7 1.0
OD2 F:ASP154 4.6 39.3 1.0
OD2 F:ASP11 4.7 48.7 1.0
CG2 F:VAL340 4.8 40.9 1.0
CG F:ASP154 4.8 39.3 1.0

Reference:

A.J.Lopez, M.Andreadaki, J.Vahokoski, E.Deligianni, L.J.Calder, S.Camerini, A.Freitag, U.Bergmann, P.B.Rosenthal, I.Siden-Kiamos, I.Kursula. Structure and Function of Plasmodium Actin II in the Parasite Mosquito Stages To Be Published.
Page generated: Thu Oct 3 20:35:07 2024

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