Magnesium in PDB 8q2n: CAS1-CAS2 Crispr Integrase Bound to Prespacer and Target Dna, Streptococcus Thermophilus Dgcc 7710 CRISPR3 System

The binding sites of Magnesium atom in the CAS1-CAS2 Crispr Integrase Bound to Prespacer and Target Dna, Streptococcus Thermophilus Dgcc 7710 CRISPR3 System (pdb code 8q2n). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the CAS1-CAS2 Crispr Integrase Bound to Prespacer and Target Dna, Streptococcus Thermophilus Dgcc 7710 CRISPR3 System, PDB code: 8q2n:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the CAS1-CAS2 Crispr Integrase Bound to Prespacer and Target Dna, Streptococcus Thermophilus Dgcc 7710 CRISPR3 System


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of CAS1-CAS2 Crispr Integrase Bound to Prespacer and Target Dna, Streptococcus Thermophilus Dgcc 7710 CRISPR3 System within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg201 b:44.7 occ:1.00 OG A:SER43 2.3 79.9 1.0 OD1 A:ASP13 2.3 80.7 1.0 CB A:SER43 2.7 62.6 1.0 OP1 H:DT17 2.9 18.2 1.0 O A:PHE12 3.1 61.4 1.0 O D:PHE42 3.5 66.6 1.0 CG A:ASP13 3.5 79.9 1.0 C A:PHE12 4.0 62.8 1.0 OE1 D:GLN41 4.0 75.8 1.0 OD2 A:ASP13 4.1 78.0 1.0 CA A:SER43 4.1 51.8 1.0 O A:SER43 4.2 57.6 1.0 OG D:SER43 4.3 77.0 1.0 P H:DT17 4.3 19.6 1.0 C A:SER43 4.4 51.5 1.0 C D:PHE42 4.4 54.2 1.0 O A:PHE42 4.5 68.2 1.0 CB D:PHE42 4.5 54.3 1.0 N A:ASP13 4.6 65.9 1.0 CA A:ASP13 4.6 68.4 1.0 N D:PHE42 4.6 53.3 1.0 CB A:ASP13 4.6 68.8 1.0 CB D:GLN41 4.6 58.0 1.0 O5' H:DT17 4.7 15.8 1.0 N A:PHE12 4.8 55.5 1.0 CA D:PHE42 4.8 53.4 1.0 O3' H:DT16 4.9 14.6 1.0 CD D:GLN41 5.0 66.8 1.0

Magnesium binding site 2 out of 2 in the CAS1-CAS2 Crispr Integrase Bound to Prespacer and Target Dna, Streptococcus Thermophilus Dgcc 7710 CRISPR3 System


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of CAS1-CAS2 Crispr Integrase Bound to Prespacer and Target Dna, Streptococcus Thermophilus Dgcc 7710 CRISPR3 System within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg201 b:42.3 occ:1.00 OP1 G:DG17 2.4 12.5 1.0 OD1 D:ASP13 2.4 80.4 1.0 OG D:SER43 2.6 77.0 1.0 O D:PHE12 2.6 61.3 1.0 CB D:SER43 2.8 60.5 1.0 CG D:ASP13 3.4 77.0 1.0 C D:PHE12 3.6 61.0 1.0 O A:PHE42 3.8 68.2 1.0 P G:DG17 3.8 13.5 1.0 OE1 A:GLN41 3.9 78.6 1.0 OD2 D:ASP13 4.1 77.5 1.0 N D:ASP13 4.2 63.3 1.0 O D:SER43 4.2 55.5 1.0 CA D:SER43 4.2 51.7 1.0 CA D:ASP13 4.2 66.7 1.0 CB D:ASP13 4.4 68.7 1.0 N D:PHE12 4.5 53.3 1.0 C D:SER43 4.5 50.6 1.0 CB A:PHE42 4.6 56.3 1.0 CB A:GLN41 4.6 59.8 1.0 OP2 G:DG17 4.6 12.7 1.0 O5' G:DG17 4.6 11.4 1.0 N A:PHE42 4.7 54.9 1.0 CA D:PHE12 4.7 56.1 1.0 C A:PHE42 4.7 55.6 1.0 OG A:SER43 4.7 79.9 1.0 O3' G:DC16 4.7 13.2 1.0 CD A:GLN41 4.8 69.3 1.0 O D:PHE42 4.8 66.6 1.0 CA A:PHE42 4.9 54.9 1.0 C5' G:DG17 5.0 11.8 1.0

G.Sasnauskas, U.Gaizauskaite, G.Tamulaitiene. Structural Basis For Spacer Acquisition in A Type II-A Crispr-Cas System To Be Published.