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Magnesium in PDB 1vrt: High Resolution Structures of Hiv-1 Rt From Four Rt- Inhibitor Complexes

Enzymatic activity of High Resolution Structures of Hiv-1 Rt From Four Rt- Inhibitor Complexes

All present enzymatic activity of High Resolution Structures of Hiv-1 Rt From Four Rt- Inhibitor Complexes:
2.7.7.49;

Protein crystallography data

The structure of High Resolution Structures of Hiv-1 Rt From Four Rt- Inhibitor Complexes, PDB code: 1vrt was solved by J.Ren, R.Esnouf, E.Garman, D.Somers, C.Ross, I.Kirby, J.Keeling, G.Darby, Y.Jones, D.Stuart, D.Stammers, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.00 / 2.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 141.800, 116.700, 66.400, 90.00, 90.00, 90.00
R / Rfree (%) 18.6 / n/a

Magnesium Binding Sites:

The binding sites of Magnesium atom in the High Resolution Structures of Hiv-1 Rt From Four Rt- Inhibitor Complexes (pdb code 1vrt). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the High Resolution Structures of Hiv-1 Rt From Four Rt- Inhibitor Complexes, PDB code: 1vrt:

Magnesium binding site 1 out of 1 in 1vrt

Go back to Magnesium Binding Sites List in 1vrt
Magnesium binding site 1 out of 1 in the High Resolution Structures of Hiv-1 Rt From Four Rt- Inhibitor Complexes


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of High Resolution Structures of Hiv-1 Rt From Four Rt- Inhibitor Complexes within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1000

b:56.8
occ:1.00
O A:HOH1158 2.4 56.5 1.0
OD2 A:ASP443 2.6 87.2 1.0
OD1 A:ASP443 2.8 84.7 1.0
CG A:ASP443 2.9 83.3 1.0
O A:VAL442 3.0 48.2 1.0
C A:VAL442 4.0 51.3 1.0
CB A:ASP443 4.3 75.7 1.0
OD1 A:ASP498 4.5 43.1 1.0
N A:VAL442 4.6 43.1 1.0
CG2 A:VAL536 4.6 35.6 1.0
CG A:ASP498 4.6 44.1 1.0
CA A:ASP443 4.8 73.3 1.0
N A:ASP443 4.8 61.9 1.0
O A:VAL496 4.8 29.0 1.0
CB A:TYR441 4.9 34.8 1.0
CB A:ASP498 4.9 44.5 1.0
C A:TYR441 4.9 40.0 1.0
CA A:VAL442 5.0 46.3 1.0
OD2 A:ASP498 5.0 53.7 1.0
N A:ASP498 5.0 37.8 1.0

Reference:

J.Ren, R.Esnouf, E.Garman, D.Somers, C.Ross, I.Kirby, J.Keeling, G.Darby, Y.Jones, D.Stuart. High Resolution Structures of Hiv-1 Rt From Four Rt-Inhibitor Complexes. Nat.Struct.Biol. V. 2 293 1995.
ISSN: ISSN 1072-8368
PubMed: 7540934
DOI: 10.1038/NSB0495-293
Page generated: Mon Dec 14 07:00:26 2020

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