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Magnesium in PDB 1vz0: Chromosome Segregation Protein SPO0J From Thermus Thermophilus

Protein crystallography data

The structure of Chromosome Segregation Protein SPO0J From Thermus Thermophilus, PDB code: 1vz0 was solved by T.A.Leonard, P.J.G.Butler, J.Lowe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.72 / 2.30
Space group C 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 182.240, 295.150, 73.490, 90.00, 90.00, 90.00
R / Rfree (%) 23.5 / 27.8

Other elements in 1vz0:

The structure of Chromosome Segregation Protein SPO0J From Thermus Thermophilus also contains other interesting chemical elements:

Cobalt (Co) 13 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Chromosome Segregation Protein SPO0J From Thermus Thermophilus (pdb code 1vz0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Chromosome Segregation Protein SPO0J From Thermus Thermophilus, PDB code: 1vz0:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 1vz0

Go back to Magnesium Binding Sites List in 1vz0
Magnesium binding site 1 out of 2 in the Chromosome Segregation Protein SPO0J From Thermus Thermophilus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Chromosome Segregation Protein SPO0J From Thermus Thermophilus within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg1214

b:24.5
occ:1.00
OE1 C:GLU103 3.8 42.4 1.0
O C:ASP98 4.0 46.6 1.0
OE2 C:GLU103 4.2 45.4 1.0
CD C:GLU103 4.4 44.0 1.0
O C:HOH2023 4.6 36.8 1.0

Magnesium binding site 2 out of 2 in 1vz0

Go back to Magnesium Binding Sites List in 1vz0
Magnesium binding site 2 out of 2 in the Chromosome Segregation Protein SPO0J From Thermus Thermophilus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Chromosome Segregation Protein SPO0J From Thermus Thermophilus within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg1217

b:27.0
occ:1.00
O D:ASP98 3.8 50.6 1.0
OE1 D:GLU103 3.8 42.6 1.0
OE2 D:GLU103 4.0 48.4 1.0
CD D:GLU103 4.4 46.3 1.0
O D:HOH2047 4.6 43.8 1.0

Reference:

T.A.Leonard, P.J.Butler, J.Lowe. Structural Analysis of the Chromosome Segregation Protein SPO0J From Thermus Thermophilus. Mol. Microbiol. V. 53 419 2004.
ISSN: ISSN 0950-382X
PubMed: 15228524
DOI: 10.1111/J.1365-2958.2004.04133.X
Page generated: Mon Dec 14 07:00:31 2020

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