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Magnesium in PDB 3g1c: The Crystal Structure of A Trpr Like Protein From Eubacterium Eligens Atcc 27750

Protein crystallography data

The structure of The Crystal Structure of A Trpr Like Protein From Eubacterium Eligens Atcc 27750, PDB code: 3g1c was solved by R.Zhang, R.Hendricks, L.Freeman, G.Babnigg, A.Joachimiak, Midwest Centerfor Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.63 / 2.20
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 48.788, 48.788, 126.477, 90.00, 90.00, 90.00
R / Rfree (%) 20.5 / 23.7

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Crystal Structure of A Trpr Like Protein From Eubacterium Eligens Atcc 27750 (pdb code 3g1c). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the The Crystal Structure of A Trpr Like Protein From Eubacterium Eligens Atcc 27750, PDB code: 3g1c:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in 3g1c

Go back to Magnesium Binding Sites List in 3g1c
Magnesium binding site 1 out of 3 in the The Crystal Structure of A Trpr Like Protein From Eubacterium Eligens Atcc 27750


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Crystal Structure of A Trpr Like Protein From Eubacterium Eligens Atcc 27750 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg105

b:65.4
occ:1.00
O A:HOH136 3.3 55.6 1.0
NH2 A:ARG74 3.4 64.4 1.0
NH1 A:ARG45 3.4 56.3 1.0
OG1 A:THR71 3.7 50.1 1.0
CG2 A:THR71 3.8 46.0 1.0
CD A:ARG45 4.0 50.7 1.0
NE A:ARG74 4.3 59.2 1.0
CB A:THR71 4.3 49.7 1.0
CZ A:ARG74 4.3 63.5 1.0
CZ A:ARG45 4.4 53.8 1.0
OG A:SER41 4.5 48.1 1.0
NE A:ARG45 4.7 52.2 1.0
CA A:THR71 4.8 49.0 1.0
CG A:ARG45 4.9 47.2 1.0

Magnesium binding site 2 out of 3 in 3g1c

Go back to Magnesium Binding Sites List in 3g1c
Magnesium binding site 2 out of 3 in the The Crystal Structure of A Trpr Like Protein From Eubacterium Eligens Atcc 27750


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of The Crystal Structure of A Trpr Like Protein From Eubacterium Eligens Atcc 27750 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg106

b:63.8
occ:1.00
O A:HOH109 3.5 46.4 1.0
N A:GLN8 3.7 50.2 1.0
CB A:GLN8 4.1 51.0 1.0
CA A:THR7 4.2 53.1 1.0
OG1 A:THR7 4.3 55.0 1.0
C A:THR7 4.5 52.0 1.0
CA A:GLN8 4.6 50.2 1.0
CB A:THR7 4.8 53.5 1.0
CG2 A:THR7 4.9 53.0 1.0

Magnesium binding site 3 out of 3 in 3g1c

Go back to Magnesium Binding Sites List in 3g1c
Magnesium binding site 3 out of 3 in the The Crystal Structure of A Trpr Like Protein From Eubacterium Eligens Atcc 27750


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of The Crystal Structure of A Trpr Like Protein From Eubacterium Eligens Atcc 27750 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg107

b:69.8
occ:1.00
OG1 A:THR35 3.7 42.9 1.0
O A:HOH114 3.7 53.7 1.0
CB A:THR35 4.0 45.3 1.0
OD1 A:ASN37 4.0 55.4 1.0
CG2 A:THR35 4.1 43.2 1.0
CB A:ASN37 4.1 44.9 1.0
CG A:ASN37 4.5 49.1 1.0

Reference:

R.Zhang, R.Hendricks, L.Freeman, G.Babnigg, A.Joachimiak. The Crystal Structure of A Trpr Like Protein From Eubacterium Eligens Atcc 27750 To Be Published.
Page generated: Wed Aug 14 14:00:33 2024

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