Magnesium in PDB 4p3y: Crystal Structure of Acinetobacter Baumannii Dsba in Complex with Ef- Tu

The structure of Crystal Structure of Acinetobacter Baumannii Dsba in Complex with Ef- Tu, PDB code: 4p3y was solved by L.Premkumar, J.L.Martin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	65.95 / 2.15
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	74.318, 78.190, 122.760, 90.00, 90.00, 90.00
R / Rfree (%)	17 / 21.5

The binding sites of Magnesium atom in the Crystal Structure of Acinetobacter Baumannii Dsba in Complex with Ef- Tu (pdb code 4p3y). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Acinetobacter Baumannii Dsba in Complex with Ef- Tu, PDB code: 4p3y:

Magnesium binding site 1 out of 1 in the Crystal Structure of Acinetobacter Baumannii Dsba in Complex with Ef- Tu


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Acinetobacter Baumannii Dsba in Complex with Ef- Tu within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg401 b:32.7 occ:1.00 O A:HOH635 2.0 36.2 1.0 OG1 A:THR26 2.0 40.3 1.0 O3B A:GDP402 2.0 24.8 1.0 O A:HOH642 2.0 29.2 1.0 O A:HOH623 2.1 33.5 1.0 O A:HOH643 2.1 39.4 1.0 HB A:THR26 3.1 39.0 1.0 CB A:THR26 3.1 39.0 1.0 PB A:GDP402 3.2 28.1 1.0 H A:THR26 3.2 30.9 1.0 O1B A:GDP402 3.4 31.8 1.0 HA A:PRO83 3.8 39.5 1.0 N A:THR26 3.8 30.9 1.0 O1A A:GDP402 3.9 35.3 1.0 HB2 A:LYS25 4.0 23.3 1.0 CA A:THR26 4.0 35.6 1.0 HG21 A:THR26 4.1 35.1 1.0 CG2 A:THR26 4.2 35.1 1.0 HE2 A:LYS25 4.2 34.7 1.0 OD1 A:ASP81 4.2 46.1 1.0 O3A A:GDP402 4.2 35.1 1.0 O2B A:GDP402 4.3 28.0 1.0 HA A:THR26 4.3 35.6 1.0 O A:PRO83 4.3 50.0 1.0 O A:CYS82 4.3 36.6 1.0 O A:HOH682 4.4 57.9 1.0 O A:HOH636 4.4 65.6 1.0 PA A:GDP402 4.4 31.5 1.0 O2A A:GDP402 4.6 33.6 1.0 CA A:PRO83 4.7 39.5 1.0 HG23 A:THR26 4.7 35.1 1.0 O A:HOH554 4.8 40.1 1.0 C A:LYS25 4.9 28.8 1.0 CB A:LYS25 4.9 23.3 1.0 H A:LYS25 4.9 26.9 1.0 HG22 A:THR26 4.9 35.1 1.0 HZ1 A:LYS25 4.9 25.0 1.0 C A:PRO83 5.0 42.0 1.0

L.Premkumar, F.Kurth, W.Duprez, M.K.Grftehauge, G.J.King, M.A.Halili, B.Heras, J.L.Martin. Structure of the Acinetobacter Baumannii Dithiol Oxidase Dsba Bound to Elongation Factor Ef-Tu Reveals A Novel Protein Interaction Site. J.Biol.Chem. V. 289 19869 2014.
ISSN: ESSN 1083-351X
PubMed: 24860094
DOI: 10.1074/JBC.M114.571737