Magnesium in PDB 6lle: Cryoem Structure of SERCA2B Wt in E1-2CA2+-Amppcp State.

All present enzymatic activity of Cryoem Structure of SERCA2B Wt in E1-2CA2+-Amppcp State.:
7.2.2.10;

The structure of Cryoem Structure of SERCA2B Wt in E1-2CA2+-Amppcp State. also contains other interesting chemical elements:

Calcium

(Ca)

2 atoms

The binding sites of Magnesium atom in the Cryoem Structure of SERCA2B Wt in E1-2CA2+-Amppcp State. (pdb code 6lle). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryoem Structure of SERCA2B Wt in E1-2CA2+-Amppcp State., PDB code: 6lle:

Magnesium binding site 1 out of 1 in the Cryoem Structure of SERCA2B Wt in E1-2CA2+-Amppcp State.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryoem Structure of SERCA2B Wt in E1-2CA2+-Amppcp State. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg2002 b:32.4 occ:1.00 OD2 A:ASP351 2.0 32.6 1.0 O A:THR353 2.1 33.0 1.0 OD1 A:ASP351 2.2 32.6 1.0 O3G A:ACP2001 2.2 43.8 1.0 OD1 A:ASP702 2.2 32.1 1.0 CG A:ASP351 2.3 32.6 1.0 CG A:ASP702 3.2 32.1 1.0 C A:THR353 3.2 33.0 1.0 PG A:ACP2001 3.5 43.8 1.0 OD2 A:ASP706 3.6 32.6 1.0 OD2 A:ASP702 3.6 32.1 1.0 CB A:ASP351 3.8 32.6 1.0 N A:THR353 3.9 33.0 1.0 CA A:THR353 3.9 33.0 1.0 CB A:THR353 3.9 33.0 1.0 O1G A:ACP2001 4.0 43.8 1.0 O2G A:ACP2001 4.2 43.8 1.0 CG2 A:THR353 4.3 33.0 1.0 N A:GLY354 4.4 30.9 1.0 N A:GLY703 4.4 30.8 1.0 O2B A:ACP2001 4.5 43.8 1.0 CB A:ASP702 4.5 32.1 1.0 OD1 A:ASN705 4.6 34.3 1.0 CG A:ASP706 4.6 32.6 1.0 N A:ASP702 4.7 32.1 1.0 C A:LYS352 4.7 30.9 1.0 CA A:GLY354 4.7 30.9 1.0 N A:LYS352 4.7 30.9 1.0 OG1 A:THR355 4.8 31.8 1.0 OD1 A:ASP706 4.8 32.6 1.0 CA A:ASP351 4.9 32.6 1.0 C A:ASP351 4.9 32.6 1.0 N A:THR355 4.9 31.8 1.0 NZ A:LYS683 4.9 33.9 1.0 C3B A:ACP2001 4.9 43.8 1.0 CA A:GLY703 4.9 30.8 1.0

Y.Zhang, M.Inoue, A.Tsutsumi, S.Watanabe, T.Nishizawa, K.Nagata, M.Kikkawa, K.Inaba. Cryo-Em Structures of SERCA2B Reveal the Mechanism of Regulation By the Luminal Extension Tail. Sci Adv V. 6 B0147 2020.
ISSN: ESSN 2375-2548
PubMed: 32851169
DOI: 10.1126/SCIADV.ABB0147