Atomistry » Magnesium » PDB 8ed6-8elx » 8efh
Atomistry »
  Magnesium »
    PDB 8ed6-8elx »
      8efh »

Magnesium in PDB 8efh: Helical Reconstruction of the Human Cardiac Actin-Tropomyosin-Myosin Complex in Complex with Adp-MG2+

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Helical Reconstruction of the Human Cardiac Actin-Tropomyosin-Myosin Complex in Complex with Adp-MG2+ (pdb code 8efh). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 6 binding sites of Magnesium where determined in the Helical Reconstruction of the Human Cardiac Actin-Tropomyosin-Myosin Complex in Complex with Adp-MG2+, PDB code: 8efh:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6;

Magnesium binding site 1 out of 6 in 8efh

Go back to Magnesium Binding Sites List in 8efh
Magnesium binding site 1 out of 6 in the Helical Reconstruction of the Human Cardiac Actin-Tropomyosin-Myosin Complex in Complex with Adp-MG2+


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Helical Reconstruction of the Human Cardiac Actin-Tropomyosin-Myosin Complex in Complex with Adp-MG2+ within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg2001

b:133.6
occ:1.00
OG1 A:THR185 2.2 144.7 1.0
O1B A:ADP2002 2.8 145.8 1.0
O3B A:ADP2002 2.9 145.8 1.0
OG A:SER242 3.1 114.0 1.0
PB A:ADP2002 3.4 145.8 1.0
CB A:THR185 3.5 144.7 1.0
N A:THR185 3.5 144.7 1.0
OE1 A:GLU228 3.6 123.3 1.0
OE2 A:GLU228 3.7 123.3 1.0
CB A:LYS184 3.9 141.8 1.0
CB A:SER242 3.9 114.0 1.0
CA A:THR185 3.9 144.7 1.0
CD A:GLU228 4.0 123.3 1.0
O2A A:ADP2002 4.3 145.8 1.0
C A:LYS184 4.4 141.8 1.0
O3A A:ADP2002 4.5 145.8 1.0
O2B A:ADP2002 4.5 145.8 1.0
CG2 A:THR185 4.5 144.7 1.0
CA A:LYS184 4.6 141.8 1.0
O1A A:ADP2002 4.6 145.8 1.0
PA A:ADP2002 4.6 145.8 1.0
O A:ASN240 4.7 119.5 1.0
ND2 A:ASN232 4.8 115.4 1.0
CG A:LYS184 4.8 141.8 1.0
N A:SER242 4.9 114.0 1.0
N A:LYS184 4.9 141.8 1.0

Magnesium binding site 2 out of 6 in 8efh

Go back to Magnesium Binding Sites List in 8efh
Magnesium binding site 2 out of 6 in the Helical Reconstruction of the Human Cardiac Actin-Tropomyosin-Myosin Complex in Complex with Adp-MG2+


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Helical Reconstruction of the Human Cardiac Actin-Tropomyosin-Myosin Complex in Complex with Adp-MG2+ within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Mg402

b:33.7
occ:1.00
O3B F:ADP401 2.1 33.8 1.0
PB F:ADP401 3.1 33.8 1.0
O2B F:ADP401 3.2 33.8 1.0
OE1 F:GLN137 3.4 35.2 1.0
OD1 F:ASP154 3.5 32.6 1.0
O3A F:ADP401 3.6 33.8 1.0
CD F:GLN137 3.9 35.2 1.0
NE2 F:GLN137 4.0 35.2 1.0
CA F:GLY156 4.3 35.6 1.0
O1B F:ADP401 4.5 33.8 1.0
CG F:ASP154 4.5 32.6 1.0
O2A F:ADP401 4.8 33.8 1.0
OD2 F:ASP154 4.8 32.6 1.0
CA F:GLY13 4.8 37.5 1.0
N F:GLY156 4.8 35.6 1.0
PA F:ADP401 4.9 33.8 1.0
CG2 F:VAL339 4.9 34.9 1.0

Magnesium binding site 3 out of 6 in 8efh

Go back to Magnesium Binding Sites List in 8efh
Magnesium binding site 3 out of 6 in the Helical Reconstruction of the Human Cardiac Actin-Tropomyosin-Myosin Complex in Complex with Adp-MG2+


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Helical Reconstruction of the Human Cardiac Actin-Tropomyosin-Myosin Complex in Complex with Adp-MG2+ within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg402

b:33.8
occ:1.00
O2B B:ADP401 2.1 38.2 1.0
PB B:ADP401 3.0 38.2 1.0
O3B B:ADP401 3.0 38.2 1.0
OE1 B:GLN137 3.1 37.2 1.0
OD2 B:ASP154 3.4 34.5 1.0
CD B:GLN137 3.8 37.2 1.0
O3A B:ADP401 3.8 38.2 1.0
NE2 B:GLN137 4.1 37.2 1.0
CG B:ASP154 4.3 34.5 1.0
O1B B:ADP401 4.4 38.2 1.0
O2A B:ADP401 4.4 38.2 1.0
CA B:GLY156 4.5 37.0 1.0
OD1 B:ASP154 4.7 34.5 1.0
OD1 B:ASP11 4.7 37.6 1.0
PA B:ADP401 4.8 38.2 1.0
CG2 B:VAL339 4.9 34.0 1.0
CA B:GLY13 4.9 39.3 1.0
CG B:GLN137 5.0 37.2 1.0

Magnesium binding site 4 out of 6 in 8efh

Go back to Magnesium Binding Sites List in 8efh
Magnesium binding site 4 out of 6 in the Helical Reconstruction of the Human Cardiac Actin-Tropomyosin-Myosin Complex in Complex with Adp-MG2+


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Helical Reconstruction of the Human Cardiac Actin-Tropomyosin-Myosin Complex in Complex with Adp-MG2+ within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg402

b:42.1
occ:1.00
O3B C:ADP401 2.1 42.5 1.0
O2B C:ADP401 2.1 42.5 1.0
PB C:ADP401 2.5 42.5 1.0
O3A C:ADP401 3.3 42.5 1.0
OE1 C:GLN137 3.5 38.5 1.0
O1B C:ADP401 3.9 42.5 1.0
OD1 C:ASP154 3.9 34.2 1.0
CD C:GLN137 4.0 38.5 1.0
NE2 C:GLN137 4.2 38.5 1.0
O2A C:ADP401 4.4 42.5 1.0
PA C:ADP401 4.4 42.5 1.0
OD2 C:ASP154 4.5 34.2 1.0
CG2 C:VAL339 4.5 37.4 1.0
CA C:GLY156 4.6 38.0 1.0
CG C:ASP154 4.7 34.2 1.0
OD1 C:ASP11 5.0 42.5 1.0

Magnesium binding site 5 out of 6 in 8efh

Go back to Magnesium Binding Sites List in 8efh
Magnesium binding site 5 out of 6 in the Helical Reconstruction of the Human Cardiac Actin-Tropomyosin-Myosin Complex in Complex with Adp-MG2+


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Helical Reconstruction of the Human Cardiac Actin-Tropomyosin-Myosin Complex in Complex with Adp-MG2+ within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg402

b:33.9
occ:1.00
O3B D:ADP401 2.2 36.8 1.0
O2B D:ADP401 3.0 36.8 1.0
PB D:ADP401 3.0 36.8 1.0
OE1 D:GLN137 3.3 34.7 1.0
O3A D:ADP401 3.6 36.8 1.0
OD1 D:ASP154 3.7 30.4 1.0
CD D:GLN137 4.0 34.7 1.0
O1B D:ADP401 4.4 36.8 1.0
CA D:GLY156 4.4 34.5 1.0
NE2 D:GLN137 4.4 34.7 1.0
OD1 D:ASP11 4.6 36.9 1.0
CG D:ASP154 4.6 30.4 1.0
CG2 D:VAL339 4.6 33.5 1.0
O2A D:ADP401 4.6 36.8 1.0
PA D:ADP401 4.7 36.8 1.0
OD2 D:ASP154 4.8 30.4 1.0
CA D:GLY13 4.9 38.3 1.0
OD2 D:ASP11 5.0 36.9 1.0

Magnesium binding site 6 out of 6 in 8efh

Go back to Magnesium Binding Sites List in 8efh
Magnesium binding site 6 out of 6 in the Helical Reconstruction of the Human Cardiac Actin-Tropomyosin-Myosin Complex in Complex with Adp-MG2+


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Helical Reconstruction of the Human Cardiac Actin-Tropomyosin-Myosin Complex in Complex with Adp-MG2+ within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg402

b:37.6
occ:1.00
O3B E:ADP401 2.1 32.7 1.0
O2B E:ADP401 2.5 32.7 1.0
PB E:ADP401 2.7 32.7 1.0
O3A E:ADP401 3.4 32.7 1.0
OE1 E:GLN137 3.6 37.6 1.0
CD E:GLN137 4.1 37.6 1.0
O1B E:ADP401 4.1 32.7 1.0
NE2 E:GLN137 4.1 37.6 1.0
OD1 E:ASP154 4.2 35.4 1.0
OD1 E:ASP11 4.3 38.5 1.0
O2A E:ADP401 4.6 32.7 1.0
PA E:ADP401 4.6 32.7 1.0
CA E:GLY13 4.7 40.4 1.0
CG2 E:VAL339 4.7 35.1 1.0
OD2 E:ASP11 4.8 38.5 1.0
CA E:GLY156 4.8 35.4 1.0
OD2 E:ASP154 4.8 35.4 1.0
CG E:ASP11 4.9 38.5 1.0
CG E:ASP154 5.0 35.4 1.0

Reference:

M.H.Doran, M.J.Rynkiewicz, D.Rassici, S.M.L.Bodt, E.Bullitt, C.M.Yengo, J.R.Moore, W.Lehman. Conformational Changes Linked to Adp Release From Human Cardiac Myosin Bound to Actin-Tropomyosin To Be Published.
Page generated: Fri Oct 4 01:12:36 2024

Last articles

Mn in 2FFL
Mn in 2GLS
Mn in 2HOJ
Mn in 2HK1
Mn in 2HR6
Mn in 2HHW
Mn in 2GVZ
Mn in 2GVD
Mn in 2HBK
Mn in 2HBM
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy