Magnesium in PDB 8f1a: Apo KIF20A[1-565] Class-1 in Complex with A Microtubule

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Apo KIF20A[1-565] Class-1 in Complex with A Microtubule (pdb code 8f1a). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Apo KIF20A[1-565] Class-1 in Complex with A Microtubule, PDB code: 8f1a:

Magnesium binding site 1 out of 1 in 8f1a

Go back to Magnesium Binding Sites List in 8f1a
Magnesium binding site 1 out of 1 in the Apo KIF20A[1-565] Class-1 in Complex with A Microtubule


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Apo KIF20A[1-565] Class-1 in Complex with A Microtubule within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg501

b:39.0
occ:1.00
O3G A:GTP501 2.2 38.5 1.0
O1G A:GTP501 2.3 38.5 1.0
PG A:GTP501 2.7 38.5 1.0
NZ B:LYS252 3.5 38.2 1.0
O2G A:GTP501 3.7 38.5 1.0
OE1 A:GLN11 3.8 37.8 1.0
O3B A:GTP501 4.0 38.5 1.0
O3A A:GTP501 4.1 38.5 1.0
CG A:GLU71 4.1 41.0 1.0
CB A:GLU71 4.2 41.0 1.0
O1B A:GTP501 4.4 38.5 1.0
OD1 A:ASP98 4.4 43.1 1.0
PB A:GTP501 4.5 38.5 1.0
O1A A:GTP501 4.5 38.5 1.0
CB A:GLN11 4.6 37.8 1.0
CE B:LYS252 4.6 38.2 1.0
PA A:GTP501 4.7 38.5 1.0
O2A A:GTP501 4.7 38.5 1.0
CD A:GLN11 4.9 37.8 1.0
CB B:ASN247 5.0 38.7 1.0

Reference:

F.M.Ranaivoson, V.Crozet, M.P.M.H.Benoit, A.A.Mohammed Khalid, C.Kikuti, M.E.Sirkia, A.El Marjou, A.B.Asenjo, H.Sosa, C.F.Schmidt, S.S.Rosenfeld, A.Houdusse. Nucleotide-Free Structures of KIF20A Illuminate Atypical Mechanochemistry in This Kinesin-6 To Be Published.
Page generated: Fri Oct 4 01:35:53 2024

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