Magnesium in PDB 9ek8: Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
27;
Binding sites:
The binding sites of Magnesium atom in the Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750
(pdb code 9ek8). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 27 binding sites of Magnesium where determined in the
Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750, PDB code: 9ek8:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 27 in 9ek8
Go back to
Magnesium Binding Sites List in 9ek8
Magnesium binding site 1 out
of 27 in the Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg301
b:40.5
occ:1.00
|
MG
|
A:BCL301
|
0.0
|
40.5
|
1.0
|
NB
|
A:BCL301
|
2.1
|
47.3
|
1.0
|
ND
|
A:BCL301
|
2.1
|
41.7
|
1.0
|
NA
|
A:BCL301
|
2.2
|
40.5
|
1.0
|
NC
|
A:BCL301
|
2.2
|
39.1
|
1.0
|
NE2
|
A:HIS31
|
2.6
|
36.6
|
1.0
|
C4D
|
A:BCL301
|
3.0
|
36.8
|
1.0
|
C1B
|
A:BCL301
|
3.0
|
38.9
|
1.0
|
C4A
|
A:BCL301
|
3.0
|
37.1
|
1.0
|
C4B
|
A:BCL301
|
3.1
|
31.5
|
1.0
|
C1C
|
A:BCL301
|
3.1
|
33.3
|
1.0
|
C1A
|
A:BCL301
|
3.2
|
38.7
|
1.0
|
C1D
|
A:BCL301
|
3.2
|
39.4
|
1.0
|
C4C
|
A:BCL301
|
3.3
|
35.9
|
1.0
|
CHB
|
A:BCL301
|
3.3
|
37.1
|
1.0
|
CHC
|
A:BCL301
|
3.4
|
35.3
|
1.0
|
CHA
|
A:BCL301
|
3.4
|
36.0
|
1.0
|
CE1
|
A:HIS31
|
3.5
|
33.4
|
1.0
|
C11
|
A:LMT304
|
3.5
|
37.7
|
1.0
|
CHD
|
A:BCL301
|
3.6
|
40.0
|
1.0
|
CD2
|
A:HIS31
|
3.7
|
35.2
|
1.0
|
C3D
|
A:BCL301
|
4.1
|
35.5
|
1.0
|
C2B
|
A:BCL301
|
4.2
|
40.2
|
1.0
|
C3B
|
A:BCL301
|
4.3
|
36.4
|
1.0
|
C2D
|
A:BCL301
|
4.3
|
36.1
|
1.0
|
C9
|
A:LMT304
|
4.4
|
37.7
|
1.0
|
C10
|
A:LMT304
|
4.4
|
37.7
|
1.0
|
C3A
|
A:BCL301
|
4.4
|
38.4
|
1.0
|
C12
|
A:LMT304
|
4.5
|
37.7
|
1.0
|
C2C
|
A:BCL301
|
4.5
|
31.7
|
1.0
|
C2A
|
A:BCL301
|
4.5
|
37.8
|
1.0
|
C3C
|
A:BCL301
|
4.6
|
38.2
|
1.0
|
ND1
|
A:HIS31
|
4.7
|
38.6
|
1.0
|
CMB
|
D:BCL102
|
4.7
|
45.5
|
1.0
|
CG
|
A:HIS31
|
4.8
|
38.5
|
1.0
|
CMD
|
B:BCL101
|
4.8
|
29.0
|
1.0
|
CBD
|
A:BCL301
|
4.9
|
36.8
|
1.0
|
CBB
|
D:BCL102
|
4.9
|
35.7
|
1.0
|
|
Magnesium binding site 2 out
of 27 in 9ek8
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Magnesium Binding Sites List in 9ek8
Magnesium binding site 2 out
of 27 in the Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg302
b:51.6
occ:1.00
|
MG
|
A:BCL302
|
0.0
|
51.6
|
1.0
|
NB
|
A:BCL302
|
2.1
|
46.0
|
1.0
|
NA
|
A:BCL302
|
2.1
|
51.6
|
1.0
|
ND
|
A:BCL302
|
2.1
|
44.8
|
1.0
|
NC
|
A:BCL302
|
2.3
|
45.0
|
1.0
|
ON2
|
A:CXM1
|
2.8
|
46.8
|
1.0
|
C4D
|
A:BCL302
|
2.9
|
43.8
|
1.0
|
C4A
|
A:BCL302
|
3.0
|
43.7
|
1.0
|
C1B
|
A:BCL302
|
3.0
|
44.9
|
1.0
|
C1A
|
A:BCL302
|
3.1
|
44.3
|
1.0
|
C4B
|
A:BCL302
|
3.1
|
42.6
|
1.0
|
C1C
|
A:BCL302
|
3.2
|
46.9
|
1.0
|
C1D
|
A:BCL302
|
3.2
|
46.3
|
1.0
|
CHB
|
A:BCL302
|
3.3
|
43.6
|
1.0
|
CHA
|
A:BCL302
|
3.3
|
42.7
|
1.0
|
C4C
|
A:BCL302
|
3.4
|
43.0
|
1.0
|
C15
|
B:BCL101
|
3.4
|
40.1
|
1.0
|
CHC
|
A:BCL302
|
3.4
|
46.1
|
1.0
|
CHD
|
A:BCL302
|
3.7
|
40.3
|
1.0
|
C16
|
B:BCL101
|
3.9
|
40.9
|
1.0
|
CN
|
A:CXM1
|
3.9
|
41.1
|
1.0
|
C3D
|
A:BCL302
|
4.1
|
45.1
|
1.0
|
C2B
|
A:BCL302
|
4.2
|
42.4
|
1.0
|
N
|
A:CXM1
|
4.2
|
41.2
|
1.0
|
C2D
|
A:BCL302
|
4.3
|
41.8
|
1.0
|
C3B
|
A:BCL302
|
4.3
|
42.7
|
1.0
|
C3A
|
A:BCL302
|
4.3
|
41.3
|
1.0
|
C2A
|
A:BCL302
|
4.4
|
47.4
|
1.0
|
C11
|
B:BCL101
|
4.5
|
38.5
|
1.0
|
C2C
|
A:BCL302
|
4.6
|
48.0
|
1.0
|
C3C
|
A:BCL302
|
4.7
|
40.5
|
1.0
|
C13
|
B:BCL101
|
4.7
|
41.7
|
1.0
|
C12
|
B:BCL101
|
4.8
|
41.6
|
1.0
|
CBD
|
A:BCL302
|
4.9
|
44.5
|
1.0
|
CBA
|
A:BCL302
|
4.9
|
53.0
|
1.0
|
ON1
|
A:CXM1
|
4.9
|
45.2
|
1.0
|
|
Magnesium binding site 3 out
of 27 in 9ek8
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Magnesium Binding Sites List in 9ek8
Magnesium binding site 3 out
of 27 in the Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg101
b:48.7
occ:1.00
|
MG
|
B:BCL101
|
0.0
|
48.7
|
1.0
|
NB
|
B:BCL101
|
2.1
|
43.2
|
1.0
|
NA
|
B:BCL101
|
2.1
|
48.7
|
1.0
|
ND
|
B:BCL101
|
2.1
|
43.2
|
1.0
|
NC
|
B:BCL101
|
2.3
|
45.9
|
1.0
|
NE2
|
B:HIS30
|
2.4
|
43.5
|
1.0
|
C4D
|
B:BCL101
|
2.9
|
37.8
|
1.0
|
C4A
|
B:BCL101
|
3.0
|
37.6
|
1.0
|
C1B
|
B:BCL101
|
3.0
|
44.8
|
1.0
|
C1A
|
B:BCL101
|
3.1
|
40.9
|
1.0
|
C4B
|
B:BCL101
|
3.1
|
37.2
|
1.0
|
CE1
|
B:HIS30
|
3.1
|
36.9
|
1.0
|
C1C
|
B:BCL101
|
3.2
|
40.6
|
1.0
|
C1D
|
B:BCL101
|
3.2
|
41.0
|
1.0
|
CHB
|
B:BCL101
|
3.3
|
43.0
|
1.0
|
CHA
|
B:BCL101
|
3.3
|
35.1
|
1.0
|
C4C
|
B:BCL101
|
3.4
|
32.9
|
1.0
|
CHC
|
B:BCL101
|
3.4
|
38.4
|
1.0
|
CD2
|
B:HIS30
|
3.6
|
38.3
|
1.0
|
CHD
|
B:BCL101
|
3.7
|
39.2
|
1.0
|
CMB
|
Q:BCL301
|
3.9
|
44.9
|
1.0
|
CBB
|
Q:BCL301
|
4.0
|
30.1
|
1.0
|
C3D
|
B:BCL101
|
4.1
|
40.2
|
1.0
|
C2B
|
B:BCL101
|
4.2
|
41.2
|
1.0
|
C2D
|
B:BCL101
|
4.3
|
37.9
|
1.0
|
C3B
|
B:BCL101
|
4.3
|
40.8
|
1.0
|
C3A
|
B:BCL101
|
4.3
|
41.4
|
1.0
|
ND1
|
B:HIS30
|
4.4
|
34.8
|
1.0
|
C2A
|
B:BCL101
|
4.4
|
44.0
|
1.0
|
C2C
|
B:BCL101
|
4.6
|
41.7
|
1.0
|
CG
|
B:HIS30
|
4.6
|
35.1
|
1.0
|
C3C
|
B:BCL101
|
4.7
|
42.5
|
1.0
|
C2B
|
Q:BCL301
|
4.8
|
41.1
|
1.0
|
CAB
|
Q:BCL301
|
4.8
|
38.2
|
1.0
|
CBD
|
B:BCL101
|
4.8
|
39.4
|
1.0
|
C16
|
A:BCL302
|
5.0
|
42.8
|
1.0
|
|
Magnesium binding site 4 out
of 27 in 9ek8
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Magnesium Binding Sites List in 9ek8
Magnesium binding site 4 out
of 27 in the Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg301
b:42.2
occ:1.00
|
MG
|
C:BCL301
|
0.0
|
42.2
|
1.0
|
ND
|
C:BCL301
|
2.1
|
40.1
|
1.0
|
NB
|
C:BCL301
|
2.1
|
47.0
|
1.0
|
NA
|
C:BCL301
|
2.2
|
42.2
|
1.0
|
NC
|
C:BCL301
|
2.2
|
42.9
|
1.0
|
NE2
|
C:HIS31
|
2.4
|
37.9
|
1.0
|
C4D
|
C:BCL301
|
3.0
|
40.4
|
1.0
|
C4A
|
C:BCL301
|
3.1
|
36.4
|
1.0
|
C1B
|
C:BCL301
|
3.1
|
36.4
|
1.0
|
C1C
|
C:BCL301
|
3.1
|
36.8
|
1.0
|
C4B
|
C:BCL301
|
3.1
|
31.8
|
1.0
|
C1A
|
C:BCL301
|
3.2
|
35.2
|
1.0
|
C1D
|
C:BCL301
|
3.2
|
40.7
|
1.0
|
C4C
|
C:BCL301
|
3.3
|
37.0
|
1.0
|
CE1
|
C:HIS31
|
3.4
|
32.6
|
1.0
|
CHB
|
C:BCL301
|
3.4
|
34.4
|
1.0
|
CHC
|
C:BCL301
|
3.4
|
34.1
|
1.0
|
CHA
|
C:BCL301
|
3.4
|
35.8
|
1.0
|
CD2
|
C:HIS31
|
3.5
|
38.0
|
1.0
|
C11
|
D:LMT101
|
3.6
|
36.8
|
1.0
|
CHD
|
C:BCL301
|
3.6
|
38.6
|
1.0
|
C10
|
D:LMT101
|
3.7
|
36.8
|
1.0
|
C3D
|
C:BCL301
|
4.1
|
38.1
|
1.0
|
C2D
|
C:BCL301
|
4.3
|
39.7
|
1.0
|
C2B
|
C:BCL301
|
4.3
|
40.7
|
1.0
|
C3B
|
C:BCL301
|
4.3
|
36.5
|
1.0
|
C3A
|
C:BCL301
|
4.4
|
38.6
|
1.0
|
C2C
|
C:BCL301
|
4.5
|
34.5
|
1.0
|
C2A
|
C:BCL301
|
4.5
|
36.5
|
1.0
|
ND1
|
C:HIS31
|
4.5
|
37.8
|
1.0
|
C3C
|
C:BCL301
|
4.5
|
38.1
|
1.0
|
CG
|
C:HIS31
|
4.6
|
37.4
|
1.0
|
CMD
|
D:BCL102
|
4.7
|
32.6
|
1.0
|
CMB
|
F:BCL101
|
4.8
|
43.1
|
1.0
|
CBD
|
C:BCL301
|
4.9
|
35.0
|
1.0
|
|
Magnesium binding site 5 out
of 27 in 9ek8
Go back to
Magnesium Binding Sites List in 9ek8
Magnesium binding site 5 out
of 27 in the Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg302
b:55.9
occ:1.00
|
MG
|
C:BCL302
|
0.0
|
55.9
|
1.0
|
NB
|
C:BCL302
|
2.1
|
47.2
|
1.0
|
NA
|
C:BCL302
|
2.1
|
55.9
|
1.0
|
ND
|
C:BCL302
|
2.1
|
43.2
|
1.0
|
NC
|
C:BCL302
|
2.3
|
46.6
|
1.0
|
ON2
|
C:CXM1
|
2.6
|
41.5
|
1.0
|
C4D
|
C:BCL302
|
2.9
|
43.6
|
1.0
|
C4A
|
C:BCL302
|
3.0
|
44.1
|
1.0
|
C1B
|
C:BCL302
|
3.0
|
44.5
|
1.0
|
C1A
|
C:BCL302
|
3.1
|
43.8
|
1.0
|
C4B
|
C:BCL302
|
3.1
|
41.6
|
1.0
|
C1C
|
C:BCL302
|
3.2
|
47.5
|
1.0
|
C1D
|
C:BCL302
|
3.2
|
44.0
|
1.0
|
CHB
|
C:BCL302
|
3.3
|
41.7
|
1.0
|
CHA
|
C:BCL302
|
3.3
|
43.5
|
1.0
|
C4C
|
C:BCL302
|
3.4
|
44.2
|
1.0
|
CHC
|
C:BCL302
|
3.5
|
46.0
|
1.0
|
CHD
|
C:BCL302
|
3.7
|
42.1
|
1.0
|
CN
|
C:CXM1
|
3.7
|
39.1
|
1.0
|
C15
|
D:BCL102
|
4.0
|
39.1
|
1.0
|
C3D
|
C:BCL302
|
4.1
|
44.0
|
1.0
|
C16
|
D:BCL102
|
4.1
|
40.2
|
1.0
|
N
|
C:CXM1
|
4.2
|
44.7
|
1.0
|
C2B
|
C:BCL302
|
4.2
|
42.6
|
1.0
|
C2D
|
C:BCL302
|
4.3
|
39.7
|
1.0
|
C3B
|
C:BCL302
|
4.3
|
44.4
|
1.0
|
C11
|
D:BCL102
|
4.3
|
40.9
|
1.0
|
C3A
|
C:BCL302
|
4.3
|
41.4
|
1.0
|
C2A
|
C:BCL302
|
4.4
|
45.5
|
1.0
|
C2C
|
C:BCL302
|
4.6
|
47.2
|
1.0
|
C3C
|
C:BCL302
|
4.7
|
43.5
|
1.0
|
C10
|
D:BCL102
|
4.7
|
46.6
|
1.0
|
C12
|
D:BCL102
|
4.8
|
45.2
|
1.0
|
ON1
|
C:CXM1
|
4.8
|
49.3
|
1.0
|
CBA
|
C:BCL302
|
4.8
|
56.4
|
1.0
|
CBD
|
C:BCL302
|
4.9
|
43.7
|
1.0
|
C13
|
D:BCL102
|
4.9
|
45.5
|
1.0
|
|
Magnesium binding site 6 out
of 27 in 9ek8
Go back to
Magnesium Binding Sites List in 9ek8
Magnesium binding site 6 out
of 27 in the Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg102
b:50.7
occ:1.00
|
MG
|
D:BCL102
|
0.0
|
50.7
|
1.0
|
NB
|
D:BCL102
|
2.1
|
41.7
|
1.0
|
ND
|
D:BCL102
|
2.1
|
41.1
|
1.0
|
NA
|
D:BCL102
|
2.1
|
50.7
|
1.0
|
NC
|
D:BCL102
|
2.3
|
40.6
|
1.0
|
NE2
|
D:HIS30
|
2.7
|
48.5
|
1.0
|
C4D
|
D:BCL102
|
2.9
|
41.3
|
1.0
|
C4A
|
D:BCL102
|
3.0
|
38.6
|
1.0
|
C1B
|
D:BCL102
|
3.0
|
41.9
|
1.0
|
C1A
|
D:BCL102
|
3.1
|
42.5
|
1.0
|
C4B
|
D:BCL102
|
3.1
|
37.6
|
1.0
|
C1C
|
D:BCL102
|
3.2
|
40.9
|
1.0
|
C1D
|
D:BCL102
|
3.2
|
43.5
|
1.0
|
CHB
|
D:BCL102
|
3.3
|
41.5
|
1.0
|
CHA
|
D:BCL102
|
3.3
|
37.8
|
1.0
|
C4C
|
D:BCL102
|
3.4
|
35.3
|
1.0
|
CHC
|
D:BCL102
|
3.4
|
40.5
|
1.0
|
CE1
|
D:HIS30
|
3.4
|
34.8
|
1.0
|
CMB
|
A:BCL301
|
3.6
|
42.1
|
1.0
|
CHD
|
D:BCL102
|
3.7
|
41.9
|
1.0
|
CBB
|
A:BCL301
|
3.7
|
29.4
|
1.0
|
CD2
|
D:HIS30
|
3.8
|
38.7
|
1.0
|
C3D
|
D:BCL102
|
4.1
|
40.5
|
1.0
|
C2B
|
D:BCL102
|
4.2
|
42.5
|
1.0
|
C3B
|
D:BCL102
|
4.3
|
41.5
|
1.0
|
C2D
|
D:BCL102
|
4.3
|
39.1
|
1.0
|
C3A
|
D:BCL102
|
4.3
|
39.8
|
1.0
|
C2A
|
D:BCL102
|
4.4
|
44.4
|
1.0
|
CAB
|
A:BCL301
|
4.5
|
37.0
|
1.0
|
C2C
|
D:BCL102
|
4.6
|
40.4
|
1.0
|
C2B
|
A:BCL301
|
4.6
|
40.2
|
1.0
|
C3C
|
D:BCL102
|
4.7
|
44.0
|
1.0
|
ND1
|
D:HIS30
|
4.7
|
35.0
|
1.0
|
CBD
|
D:BCL102
|
4.8
|
41.0
|
1.0
|
CG
|
D:HIS30
|
4.9
|
34.8
|
1.0
|
CG1
|
C:VAL30
|
4.9
|
33.1
|
1.0
|
C3B
|
A:BCL301
|
4.9
|
36.4
|
1.0
|
|
Magnesium binding site 7 out
of 27 in 9ek8
Go back to
Magnesium Binding Sites List in 9ek8
Magnesium binding site 7 out
of 27 in the Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg301
b:42.7
occ:1.00
|
MG
|
E:BCL301
|
0.0
|
42.7
|
1.0
|
NB
|
E:BCL301
|
2.1
|
44.2
|
1.0
|
ND
|
E:BCL301
|
2.1
|
38.6
|
1.0
|
NA
|
E:BCL301
|
2.2
|
42.7
|
1.0
|
NC
|
E:BCL301
|
2.2
|
39.2
|
1.0
|
NE2
|
E:HIS31
|
2.6
|
38.7
|
1.0
|
C4D
|
E:BCL301
|
3.0
|
35.1
|
1.0
|
C1B
|
E:BCL301
|
3.0
|
33.9
|
1.0
|
C4A
|
E:BCL301
|
3.0
|
36.0
|
1.0
|
C4B
|
E:BCL301
|
3.1
|
31.8
|
1.0
|
C1C
|
E:BCL301
|
3.1
|
33.9
|
1.0
|
C1A
|
E:BCL301
|
3.2
|
35.8
|
1.0
|
C1D
|
E:BCL301
|
3.2
|
38.6
|
1.0
|
C4C
|
E:BCL301
|
3.3
|
35.7
|
1.0
|
CHB
|
E:BCL301
|
3.4
|
38.3
|
1.0
|
CHC
|
E:BCL301
|
3.4
|
34.6
|
1.0
|
C11
|
F:LMT102
|
3.4
|
40.5
|
1.0
|
CHA
|
E:BCL301
|
3.4
|
32.9
|
1.0
|
CE1
|
E:HIS31
|
3.5
|
33.9
|
1.0
|
CHD
|
E:BCL301
|
3.6
|
37.4
|
1.0
|
CD2
|
E:HIS31
|
3.6
|
37.8
|
1.0
|
C10
|
F:LMT102
|
3.9
|
40.5
|
1.0
|
C3D
|
E:BCL301
|
4.1
|
35.5
|
1.0
|
C2B
|
E:BCL301
|
4.3
|
37.9
|
1.0
|
C2D
|
E:BCL301
|
4.3
|
35.7
|
1.0
|
C3B
|
E:BCL301
|
4.3
|
34.8
|
1.0
|
C3A
|
E:BCL301
|
4.4
|
36.1
|
1.0
|
C2C
|
E:BCL301
|
4.5
|
34.4
|
1.0
|
C2A
|
E:BCL301
|
4.5
|
36.0
|
1.0
|
C3C
|
E:BCL301
|
4.5
|
39.2
|
1.0
|
ND1
|
E:HIS31
|
4.7
|
35.4
|
1.0
|
C12
|
F:LMT102
|
4.7
|
40.5
|
1.0
|
CMD
|
F:BCL101
|
4.8
|
34.2
|
1.0
|
CG
|
E:HIS31
|
4.8
|
38.7
|
1.0
|
CMB
|
H:BCL102
|
4.8
|
44.5
|
1.0
|
CBB
|
H:BCL102
|
4.8
|
37.1
|
1.0
|
CBD
|
E:BCL301
|
4.9
|
34.9
|
1.0
|
|
Magnesium binding site 8 out
of 27 in 9ek8
Go back to
Magnesium Binding Sites List in 9ek8
Magnesium binding site 8 out
of 27 in the Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg302
b:57.2
occ:1.00
|
MG
|
E:BCL302
|
0.0
|
57.2
|
1.0
|
NB
|
E:BCL302
|
2.1
|
47.8
|
1.0
|
NA
|
E:BCL302
|
2.1
|
57.2
|
1.0
|
ND
|
E:BCL302
|
2.1
|
44.1
|
1.0
|
NC
|
E:BCL302
|
2.3
|
49.1
|
1.0
|
ON2
|
E:CXM1
|
2.4
|
43.5
|
1.0
|
C4D
|
E:BCL302
|
2.9
|
44.1
|
1.0
|
C4A
|
E:BCL302
|
3.0
|
43.9
|
1.0
|
C1B
|
E:BCL302
|
3.0
|
44.3
|
1.0
|
C1A
|
E:BCL302
|
3.1
|
43.8
|
1.0
|
C4B
|
E:BCL302
|
3.1
|
45.7
|
1.0
|
C1C
|
E:BCL302
|
3.2
|
47.5
|
1.0
|
C1D
|
E:BCL302
|
3.2
|
46.5
|
1.0
|
CHB
|
E:BCL302
|
3.3
|
41.9
|
1.0
|
CHA
|
E:BCL302
|
3.3
|
42.1
|
1.0
|
C4C
|
E:BCL302
|
3.4
|
46.6
|
1.0
|
CHC
|
E:BCL302
|
3.4
|
48.7
|
1.0
|
CN
|
E:CXM1
|
3.6
|
39.2
|
1.0
|
CHD
|
E:BCL302
|
3.7
|
42.9
|
1.0
|
C12
|
F:BCL101
|
3.8
|
40.2
|
1.0
|
C16
|
F:BCL101
|
3.9
|
38.7
|
1.0
|
N
|
E:CXM1
|
4.1
|
41.3
|
1.0
|
C3D
|
E:BCL302
|
4.1
|
44.9
|
1.0
|
C15
|
F:BCL101
|
4.1
|
38.1
|
1.0
|
C2B
|
E:BCL302
|
4.2
|
43.9
|
1.0
|
C2D
|
E:BCL302
|
4.3
|
43.5
|
1.0
|
C3B
|
E:BCL302
|
4.3
|
45.3
|
1.0
|
C3A
|
E:BCL302
|
4.3
|
42.4
|
1.0
|
C2A
|
E:BCL302
|
4.4
|
47.4
|
1.0
|
C2C
|
E:BCL302
|
4.6
|
46.9
|
1.0
|
C13
|
F:BCL101
|
4.6
|
45.5
|
1.0
|
ON1
|
E:CXM1
|
4.6
|
48.6
|
1.0
|
C3C
|
E:BCL302
|
4.7
|
42.3
|
1.0
|
CBD
|
E:BCL302
|
4.8
|
44.8
|
1.0
|
C10
|
F:BCL101
|
5.0
|
45.7
|
1.0
|
CBA
|
E:BCL302
|
5.0
|
54.7
|
1.0
|
|
Magnesium binding site 9 out
of 27 in 9ek8
Go back to
Magnesium Binding Sites List in 9ek8
Magnesium binding site 9 out
of 27 in the Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Mg101
b:50.2
occ:1.00
|
MG
|
F:BCL101
|
0.0
|
50.2
|
1.0
|
NB
|
F:BCL101
|
2.1
|
41.0
|
1.0
|
ND
|
F:BCL101
|
2.1
|
45.3
|
1.0
|
NA
|
F:BCL101
|
2.1
|
50.2
|
1.0
|
NC
|
F:BCL101
|
2.3
|
45.2
|
1.0
|
NE2
|
F:HIS30
|
2.6
|
43.7
|
1.0
|
C4D
|
F:BCL101
|
2.9
|
41.3
|
1.0
|
C4A
|
F:BCL101
|
3.0
|
37.8
|
1.0
|
C1B
|
F:BCL101
|
3.0
|
46.4
|
1.0
|
C4B
|
F:BCL101
|
3.1
|
37.2
|
1.0
|
C1A
|
F:BCL101
|
3.1
|
40.0
|
1.0
|
C1C
|
F:BCL101
|
3.2
|
42.6
|
1.0
|
C1D
|
F:BCL101
|
3.2
|
41.6
|
1.0
|
CHB
|
F:BCL101
|
3.3
|
42.4
|
1.0
|
CHA
|
F:BCL101
|
3.3
|
31.9
|
1.0
|
C4C
|
F:BCL101
|
3.4
|
34.8
|
1.0
|
CE1
|
F:HIS30
|
3.4
|
31.7
|
1.0
|
CHC
|
F:BCL101
|
3.4
|
40.8
|
1.0
|
CHD
|
F:BCL101
|
3.7
|
37.7
|
1.0
|
CMB
|
C:BCL301
|
3.7
|
41.6
|
1.0
|
CBB
|
C:BCL301
|
3.7
|
30.0
|
1.0
|
CD2
|
F:HIS30
|
3.8
|
34.9
|
1.0
|
C3D
|
F:BCL101
|
4.1
|
41.3
|
1.0
|
C2B
|
F:BCL101
|
4.2
|
43.8
|
1.0
|
C3B
|
F:BCL101
|
4.2
|
39.3
|
1.0
|
C2D
|
F:BCL101
|
4.3
|
37.6
|
1.0
|
C3A
|
F:BCL101
|
4.3
|
43.9
|
1.0
|
C2A
|
F:BCL101
|
4.4
|
46.7
|
1.0
|
CAB
|
C:BCL301
|
4.5
|
34.7
|
1.0
|
C2C
|
F:BCL101
|
4.6
|
43.8
|
1.0
|
ND1
|
F:HIS30
|
4.6
|
35.8
|
1.0
|
C2B
|
C:BCL301
|
4.6
|
40.7
|
1.0
|
C3C
|
F:BCL101
|
4.7
|
44.8
|
1.0
|
CBD
|
F:BCL101
|
4.8
|
39.8
|
1.0
|
CG
|
F:HIS30
|
4.9
|
31.3
|
1.0
|
CG1
|
E:VAL30
|
4.9
|
30.1
|
1.0
|
C3B
|
C:BCL301
|
4.9
|
36.5
|
1.0
|
|
Magnesium binding site 10 out
of 27 in 9ek8
Go back to
Magnesium Binding Sites List in 9ek8
Magnesium binding site 10 out
of 27 in the Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Light Harvesting Complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) Acidophilus Strain 7750 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Mg301
b:42.6
occ:1.00
|
MG
|
G:BCL301
|
0.0
|
42.6
|
1.0
|
NB
|
G:BCL301
|
2.1
|
44.8
|
1.0
|
ND
|
G:BCL301
|
2.1
|
38.2
|
1.0
|
NA
|
G:BCL301
|
2.2
|
42.6
|
1.0
|
NC
|
G:BCL301
|
2.2
|
41.8
|
1.0
|
NE2
|
G:HIS31
|
2.6
|
38.5
|
1.0
|
C4D
|
G:BCL301
|
3.0
|
36.6
|
1.0
|
C4A
|
G:BCL301
|
3.0
|
35.5
|
1.0
|
C1B
|
G:BCL301
|
3.0
|
36.6
|
1.0
|
C4B
|
G:BCL301
|
3.1
|
31.2
|
1.0
|
C1C
|
G:BCL301
|
3.1
|
35.8
|
1.0
|
C1A
|
G:BCL301
|
3.2
|
33.9
|
1.0
|
C1D
|
G:BCL301
|
3.2
|
38.7
|
1.0
|
C4C
|
G:BCL301
|
3.3
|
36.2
|
1.0
|
CHB
|
G:BCL301
|
3.3
|
32.2
|
1.0
|
CHC
|
G:BCL301
|
3.4
|
31.9
|
1.0
|
CHA
|
G:BCL301
|
3.4
|
33.9
|
1.0
|
CE1
|
G:HIS31
|
3.5
|
29.2
|
1.0
|
CHD
|
G:BCL301
|
3.6
|
39.6
|
1.0
|
CD2
|
G:HIS31
|
3.7
|
34.6
|
1.0
|
C11
|
H:LMT101
|
3.9
|
37.9
|
1.0
|
C9
|
H:LMT101
|
4.0
|
37.9
|
1.0
|
C3D
|
G:BCL301
|
4.1
|
37.0
|
1.0
|
C2B
|
G:BCL301
|
4.3
|
41.2
|
1.0
|
C2D
|
G:BCL301
|
4.3
|
35.9
|
1.0
|
C3B
|
G:BCL301
|
4.3
|
36.8
|
1.0
|
C3A
|
G:BCL301
|
4.4
|
38.5
|
1.0
|
C2C
|
G:BCL301
|
4.5
|
35.8
|
1.0
|
C2A
|
G:BCL301
|
4.5
|
38.7
|
1.0
|
C10
|
H:LMT101
|
4.5
|
37.9
|
1.0
|
C3C
|
G:BCL301
|
4.5
|
37.1
|
1.0
|
CMB
|
J:BCL101
|
4.7
|
41.9
|
1.0
|
ND1
|
G:HIS31
|
4.7
|
34.0
|
1.0
|
CMD
|
H:BCL102
|
4.8
|
28.6
|
1.0
|
CG
|
G:HIS31
|
4.8
|
37.3
|
1.0
|
CBB
|
J:BCL101
|
4.9
|
35.7
|
1.0
|
CBD
|
G:BCL301
|
4.9
|
33.4
|
1.0
|
|
Reference:
D.Wang,
D.Harris,
C.Chuang,
G.P.Schmidt,
O.C.Feibig,
G.S.Schlau-Cohen.
Robust Light-Harvesting Properties Upon Chromatic Acclimation in Purple Bacteria To Be Published.
Page generated: Sat Aug 16 01:20:43 2025
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