Magnesium in PDB, part 355 (files: 14161-14200),
PDB 6dw7-6e8s
Experimental structures of coordination spheres of Magnesium (Mg) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Magnesium atoms. PDB files: 14161-14200 (PDB 6dw7-6e8s).
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6dw7 (Mg: 4) - SAMHD1 Without Catalytic Nucleotides
Other atoms:
Na (3);
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6dwd (Mg: 10) - SAMHD1 Bound to Clofarabine-Tp in the Catalytic Pocket and Allosteric Pocket
Other atoms:
F (8);
Na (23);
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6dwj (Mg: 10) - SAMHD1 Bound to Vidarabine-Tp in the Catalytic Pocket
Other atoms:
Na (17);
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6dwk (Mg: 9) - SAMHD1 Bound to Fludarabine-Tp in the Catalytic Pocket
Other atoms:
F (4);
Na (23);
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6dws (Mg: 2) - Crystal Structure of Human GRP78 in Complex with (2R,3R,4S,5R)-2-(6- Amino-8-((2-Chlorobenzyl)Amino)-9H-Purin-9-Yl)-5-(Hydroxymethyl) Tetrahydrofuran-3,4-Diol
Other atoms:
Cl (2);
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6dwt (Mg: 1) - Crystal Structure of Double-Stranded Dna Gaggcctc, Crystals Grown in MG2+
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6dx3 (Mg: 2) - Crystal Structure of the Viral Otu Domain Protease From Taggert Virus
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6dyg (Mg: 1) - Fe(II)-Bound Structure of the Engineered Cyt CB562 Variant, CH3Y
Other atoms:
Fe (3);
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6dyj (Mg: 1) - Iron-Bound Structure of the Engineered Cyt B562 Variant, CH3Y*
Other atoms:
Fe (2);
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6dyy (Mg: 2) - Crystal Structure of Helicobacter Pylori 5'-Methylthioadenosine/S- Adenosyl Homocysteine Nucleosidase (Mtan) Complexed with (3R,4S)-1- ((4-Amino-5H-Pyrrolo[3,2-D]Pyrimidin-7-Yl)Methyl)-4-(((3-(1-Butyl-1H- 1,2,3-Triazol-4-Yl)Propyl)Thio)Methyl)Pyrrolidin-3-Ol
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6dzh (Mg: 4) - Hras G13D Bound to Gdp (H13GDP)
Other atoms:
Ca (2);
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6e05 (Mg: 4) - Crystal Structure of Mycobacterium Tuberculosis Dethiobiotin Synthetase in Complex with Cytidine Triphosphate Solved By Precipitant-Ligand Exchange (Crystals Grown in Sulfate Precipitant)
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6e06 (Mg: 4) - Crystal Structure of Mycobacterium Tuberculosis Dethiobiotin Synthetase in Complex with Cytidine Triphosphate Solved By Precipitant-Ligand Exchange (Crystals Grown in Citrate Precipitant)
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6e0l (Mg: 1) - Structure of Rhodothermus Marinus Cdne C-Ump-Amp Synthase with Apcpp and Upnpp
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6e0n (Mg: 1) - Structure of Elizabethkingia Meningoseptica Cdne Cyclic Dinucleotide Synthase with Gtp and Apcpp
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6e0o (Mg: 1) - Structure of Elizabethkingia Meningoseptica Cdne Cyclic Dinucleotide Synthase with Pppa[3'-5']Pa
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6e0w (Mg: 3) - Crystal Structure of the Colanidase Tailspike Protein GP150 of Phage PHI92 Complexed with One Repeating Unit of Colanic Acid
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6e12 (Mg: 2) - Crystal Structure of the ALR8543 Protein in Complex with Oleic Acid and Magnesium Ion From Nostoc Sp. Pcc 7120, Northeast Structural Genomics Consortium Target NSR141
Other atoms:
Cl (1);
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6e1t (Mg: 4) - Crystal Structure of A Class I PREQ1 Riboswitch Complexed with A Synthetic Compound 1: 2-[(Dibenzo[B,D]Furan-2-Yl)Oxy]Ethan-1-Amine
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6e1u (Mg: 1) - Crystal Structure of A Class I PREQ1 Riboswitch Complexed with A Synthetic Compound 2: 2-[(Dibenzo[B,D]Furan-2-Yl)Oxy]-N,N- Dimethylethan-1-Amine
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6e1w (Mg: 1) - Crystal Structure of A Class I PREQ1 Riboswitch Complexed with PREQ1
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6e20 (Mg: 2) - Crystal Structure of the Dario Rerio Galectin-1-L2
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6e2u (Mg: 1) - Mddef in Complex with Mvapp, Amppcp and Magnesium
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6e2v (Mg: 2) - Mddef in Complex with Mvapp, ADPBEF3 and Magnesium
Other atoms:
F (3);
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6e36 (Mg: 2) - The Structure of the Variable Domain of Streptococcus Intermedius Antigen I/II (Pas)
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6e3v (Mg: 2) - Structure of Human Dna Polymerase Beta Complexed with 8OA in the Template Base Paired with Incoming Non-Hydrolyzable Ttp
Other atoms:
Na (2);
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6e3w (Mg: 2) - Structure of Human Dna Polymerase Beta Complexed with 8OA in the Template Base Paired with Incoming Non-Hydrolyzable Gtp
Other atoms:
Na (2);
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6e3x (Mg: 2) - Structure of Human Dna Polymerase Beta Complexed with 8OA in the Template Base Paired with Incoming Non-Hydrolyzable Atp
Other atoms:
Na (2);
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6e47 (Mg: 6) - Crystal Structure of the Murine Norovirus VP1 P Domain in Complex with the CD300LF Receptor and Glycochenodeoxycholic Acid
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6e53 (Mg: 2) - Structure of Tert in Complex with A Novel Telomerase Inhibitor
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6e60 (Mg: 2) - Bacteroides Ovatus Mixed-Linkage Glucan Utilization Locus (Mlgul) Sgbp-A
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6e61 (Mg: 2) - Bacteroides Ovatus Mixed-Linkage Glucan Utilization Locus (Mlgul) Sgbp-A in Complex with Mixed-Linkage Heptasaccharide
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6e6c (Mg: 1) - Hras G13D Bound to Gppnhp (H13GNP)
Other atoms:
Ca (1);
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6e6f (Mg: 1) - Kras G13D Bound to Gppnhp (K13GNP)
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6e6h (Mg: 1) - Nras G13D Bound to Gppnhp (N13GNP)
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6e6p (Mg: 3) - Hras G13D Bound to Gppnhp (Ha,B,C13GNP)
Other atoms:
Ca (2);
Na (1);
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6e7b (Mg: 2) - 13-Pf 3-Start Gmpcpp-Human ALPHA1B/BETA3 Microtubules
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6e7c (Mg: 2) - 14-Pf 3-Start Gmpcpp-Human ALPHA1B/BETA2B Microtubules
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6e80 (Mg: 4) - Crystal Structure of the Corn Aptamer in Unliganded State
Other atoms:
K (1);
Ir (5);
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6e8s (Mg: 2) - Structure of the Imango-III Aptamer Bound to TO1-Biotin
Other atoms:
K (2);
Na (4);
Page generated: Tue Feb 25 10:36:14 2025
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