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Magnesium in PDB 2i2i: Crystal Structure of the DB293-D(Cgcgaattcgcg)2 Complex.

Protein crystallography data

The structure of Crystal Structure of the DB293-D(Cgcgaattcgcg)2 Complex., PDB code: 2i2i was solved by M.P.H.Lee, S.Neidle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 1.63
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 24.176, 39.762, 65.750, 90.00, 90.00, 90.00
R / Rfree (%) 22 / 31.3

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the DB293-D(Cgcgaattcgcg)2 Complex. (pdb code 2i2i). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the DB293-D(Cgcgaattcgcg)2 Complex., PDB code: 2i2i:

Magnesium binding site 1 out of 1 in 2i2i

Go back to Magnesium Binding Sites List in 2i2i
Magnesium binding site 1 out of 1 in the Crystal Structure of the DB293-D(Cgcgaattcgcg)2 Complex.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the DB293-D(Cgcgaattcgcg)2 Complex. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg26

b:22.6
occ:1.00
O B:HOH104 2.1 21.7 1.0
O A:HOH100 2.1 25.5 1.0
O A:HOH102 2.1 19.7 1.0
O B:HOH102 2.1 22.5 1.0
O A:HOH101 2.1 20.5 1.0
O B:HOH103 2.1 26.1 1.0
O6 B:DG22 4.1 21.6 1.0
O B:HOH37 4.1 24.9 1.0
O B:HOH27 4.2 21.4 1.0
O A:HOH28 4.3 27.2 1.0
C5 A:DC1 4.3 22.7 1.0
N7 A:DG2 4.4 20.8 1.0
O B:HOH32 4.4 29.2 1.0
O A:HOH38 4.5 28.2 1.0
O6 A:DG2 4.5 22.3 1.0
C6 A:DC1 4.7 19.7 1.0

Reference:

M.P.H.Lee, S.Neidle. Crystal Structure of the DB293-D(Cgcgaattcgcg)2 Complex. To Be Published.
Page generated: Sun Aug 10 11:30:29 2025

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