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Magnesium in PDB 4c4p: Crystal Structure of Wild-Type RAB11 Complexed to FIP2

Protein crystallography data

The structure of Crystal Structure of Wild-Type RAB11 Complexed to FIP2, PDB code: 4c4p was solved by A.Sultana, A.R.Khan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.955 / 2.00
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 64.560, 64.560, 112.860, 90.00, 90.00, 120.00
R / Rfree (%) 18.04 / 22.34

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Wild-Type RAB11 Complexed to FIP2 (pdb code 4c4p). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Wild-Type RAB11 Complexed to FIP2, PDB code: 4c4p:

Magnesium binding site 1 out of 1 in 4c4p

Go back to Magnesium Binding Sites List in 4c4p
Magnesium binding site 1 out of 1 in the Crystal Structure of Wild-Type RAB11 Complexed to FIP2


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Wild-Type RAB11 Complexed to FIP2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1175

b:17.4
occ:1.00
O1G A:GNP1174 1.9 16.6 1.0
O2B A:GNP1174 2.0 20.1 1.0
OG A:SER25 2.0 13.7 1.0
O A:HOH2024 2.1 17.1 1.0
O A:HOH2022 2.1 14.9 1.0
OG1 A:THR43 2.1 16.6 1.0
H A:THR43 3.0 22.6 1.0
PG A:GNP1174 3.1 19.9 1.0
HB2 A:SER25 3.1 21.7 1.0
CB A:SER25 3.1 18.1 1.0
CB A:THR43 3.2 14.5 1.0
HB A:THR43 3.2 17.4 1.0
PB A:GNP1174 3.2 18.1 1.0
H A:SER25 3.3 23.4 1.0
N3B A:GNP1174 3.4 16.9 1.0
N A:THR43 3.6 18.8 1.0
HB3 A:SER25 3.8 21.7 1.0
O2G A:GNP1174 3.8 13.5 1.0
OD2 A:ASP66 3.9 20.2 1.0
N A:SER25 3.9 19.5 1.0
CA A:THR43 4.0 19.4 1.0
O A:HOH2023 4.0 21.5 1.0
HB2 A:LYS24 4.0 21.6 1.0
CA A:SER25 4.1 16.4 1.0
HA A:ALA68 4.1 21.0 1.0
O2A A:GNP1174 4.1 22.0 1.0
HA A:SER42 4.2 28.7 1.0
OD1 A:ASP66 4.2 19.0 1.0
HA A:THR43 4.2 23.2 1.0
O1B A:GNP1174 4.2 17.8 1.0
O3A A:GNP1174 4.3 15.9 1.0
HE2 A:LYS24 4.3 16.2 1.0
HG22 A:THR43 4.3 18.5 1.0
CG2 A:THR43 4.4 15.4 1.0
HA A:SER25 4.4 19.6 1.0
O3G A:GNP1174 4.4 18.4 1.0
CG A:ASP66 4.5 18.6 1.0
PA A:GNP1174 4.5 21.6 1.0
O A:LYS41 4.5 25.2 1.0
O A:HOH2037 4.5 34.4 1.0
O1A A:GNP1174 4.6 18.3 1.0
C A:SER42 4.7 21.8 1.0
HG21 A:THR43 4.7 18.5 1.0
O A:THR67 4.8 16.4 1.0
O A:HOH2041 4.8 22.9 1.0
HZ2 A:LYS24 4.9 18.7 1.0
CA A:SER42 4.9 23.9 1.0
CB A:LYS24 4.9 18.0 1.0
CA A:ALA68 5.0 17.5 1.0
HZ1 A:LYS24 5.0 18.7 1.0

Reference:

P.Lall, C.P.Horgan, S.Oda, E.Franklin, A.Sultana, S.R.Hanscomb, M.W.Mccaffrey, A.R.Khan. Structural and Functional Analysis of FIP2 Binding to the Endosome-Localised RAB25 Gtpase Biochim.Biophys.Acta V.1834 2679 2013.
ISSN: ISSN 0006-3002
PubMed: 24056041
DOI: 10.1016/J.BBAPAP.2013.09.005
Page generated: Thu Aug 15 16:41:38 2024

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