Magnesium in PDB 5x6a: Crystal Structure of An Endoglucanase Pmo-5

The structure of Crystal Structure of An Endoglucanase Pmo-5, PDB code: 5x6a was solved by Q.Shen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.50 / 1.70
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	44.054, 48.926, 54.192, 75.55, 88.29, 76.51
R / Rfree (%)	13.5 / 16.6

The binding sites of Magnesium atom in the Crystal Structure of An Endoglucanase Pmo-5 (pdb code 5x6a). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of An Endoglucanase Pmo-5, PDB code: 5x6a:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of An Endoglucanase Pmo-5


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of An Endoglucanase Pmo-5 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg301 b:19.3 occ:1.00 N A:GLY42 3.2 14.7 1.0 O A:HOH466 3.3 25.3 1.0 N A:LEU41 3.4 27.3 1.0 CA A:ALA38 3.4 15.7 1.0 N A:ASP40 3.4 25.0 1.0 C A:ALA38 3.7 17.0 1.0 CB A:ALA38 3.7 19.6 1.0 N A:THR39 3.9 17.5 1.0 NE A:ARG58 3.9 31.6 1.0 CB A:ASP40 3.9 31.1 1.0 CA A:ASP40 4.0 25.9 1.0 CA A:GLY42 4.0 12.1 1.0 C A:ASP40 4.0 26.9 1.0 CD A:ARG58 4.0 23.3 1.0 CA A:LEU41 4.1 24.2 1.0 C A:LEU41 4.2 19.5 1.0 O A:ALA38 4.3 17.4 1.0 O A:THR37 4.3 19.3 1.0 CB A:LEU41 4.3 24.5 1.0 C A:THR39 4.5 23.3 1.0 N A:PHE43 4.5 8.3 1.0 C A:GLY42 4.6 9.2 1.0 N A:ALA38 4.6 12.2 1.0 CZ A:ARG58 4.7 37.9 1.0 CA A:THR39 4.8 19.3 1.0 O A:PHE43 4.8 8.5 1.0 C A:THR37 4.9 12.9 1.0 O A:ASP40 5.0 36.5 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of An Endoglucanase Pmo-5


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of An Endoglucanase Pmo-5 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg301 b:21.6 occ:1.00 NH1 B:ARG58 2.7 40.0 1.0 N B:GLY42 3.2 15.6 1.0 CA B:ALA38 3.3 19.6 1.0 CZ B:ARG58 3.4 40.8 1.0 N B:ASP40 3.5 25.0 1.0 N B:LEU41 3.6 27.4 1.0 CB B:ALA38 3.6 24.7 1.0 C B:ALA38 3.6 19.7 1.0 N B:THR39 3.8 17.0 1.0 CA B:GLY42 3.9 11.6 1.0 CB B:ASP40 4.0 33.4 1.0 NH2 B:ARG58 4.0 46.1 1.0 CA B:ASP40 4.1 30.8 1.0 NE B:ARG58 4.1 37.2 1.0 O B:HOH410 4.2 34.7 1.0 C B:ASP40 4.2 30.4 1.0 O B:ALA38 4.2 19.8 1.0 C B:LEU41 4.2 19.7 1.0 CA B:LEU41 4.4 27.9 1.0 CD B:ARG58 4.4 25.5 1.0 O B:THR37 4.4 18.9 1.0 N B:PHE43 4.5 6.9 1.0 C B:GLY42 4.5 8.8 1.0 C B:THR39 4.6 24.9 1.0 N B:ALA38 4.6 15.0 1.0 O B:PHE43 4.7 9.2 1.0 CA B:THR39 4.8 17.9 1.0 CB B:LEU41 4.9 31.9 1.0 CE1 B:HIS57 4.9 7.9 1.0 C B:THR37 5.0 15.8 1.0

Q.Shen, Q.Shen. N/A N/A.