Magnesium in PDB 6jyl: The Crosslinked Complex of Iswi-Nucleosome in the Adp.Bef-Bound State

The structure of The Crosslinked Complex of Iswi-Nucleosome in the Adp.Bef-Bound State also contains other interesting chemical elements:

Fluorine

(F)

3 atoms

The binding sites of Magnesium atom in the The Crosslinked Complex of Iswi-Nucleosome in the Adp.Bef-Bound State (pdb code 6jyl). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Crosslinked Complex of Iswi-Nucleosome in the Adp.Bef-Bound State, PDB code: 6jyl:

Magnesium binding site 1 out of 1 in the The Crosslinked Complex of Iswi-Nucleosome in the Adp.Bef-Bound State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Crosslinked Complex of Iswi-Nucleosome in the Adp.Bef-Bound State within 5.0Å range: probe atom residue distance (Å) B Occ K:Mg1203 b:0.7 occ:1.00 O3B K:ADP1201 2.1 0.1 1.0 F3 K:BEF1202 2.4 1.0 1.0 BE K:BEF1202 2.6 1.0 1.0 F1 K:BEF1202 2.9 1.0 1.0 O1A K:ADP1201 2.9 0.1 1.0 O2A K:ADP1201 3.1 0.1 1.0 PA K:ADP1201 3.3 0.1 1.0 PB K:ADP1201 3.4 0.1 1.0 OG1 K:THR228 3.5 0.5 1.0 O1B K:ADP1201 3.8 0.1 1.0 O3A K:ADP1201 3.8 0.1 1.0 OD1 K:ASP324 4.2 0.1 1.0 F2 K:BEF1202 4.3 1.0 1.0 OD2 K:ASP324 4.6 0.1 1.0 O2B K:ADP1201 4.6 0.1 1.0 CG K:ASP324 4.8 0.1 1.0 O K:GLY584 4.8 0.5 1.0 O5' K:ADP1201 4.8 0.1 1.0 N K:THR228 4.9 0.5 1.0 CB K:THR228 4.9 0.5 1.0

L.Yan, H.Wu, X.Li, N.Gao, Z.Chen. Structures of the Iswi-Nucleosome Complex Reveal A Conserved Mechanism of Chromatin Remodeling. Nat.Struct.Mol.Biol. V. 26 258 2019.
ISSN: ESSN 1545-9985
PubMed: 30872815
DOI: 10.1038/S41594-019-0199-9