Magnesium in PDB 7kim: Mycobacterium Tuberculosis Wt Rnap Transcription Closed Promoter Complex with WHIB7 Transcription Factor

Enzymatic activity of Mycobacterium Tuberculosis Wt Rnap Transcription Closed Promoter Complex with WHIB7 Transcription Factor

All present enzymatic activity of Mycobacterium Tuberculosis Wt Rnap Transcription Closed Promoter Complex with WHIB7 Transcription Factor:
2.7.7.6;

Other elements in 7kim:

The structure of Mycobacterium Tuberculosis Wt Rnap Transcription Closed Promoter Complex with WHIB7 Transcription Factor also contains other interesting chemical elements:

Iron	(Fe)	4 atoms
Zinc	(Zn)	2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Mycobacterium Tuberculosis Wt Rnap Transcription Closed Promoter Complex with WHIB7 Transcription Factor (pdb code 7kim). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Mycobacterium Tuberculosis Wt Rnap Transcription Closed Promoter Complex with WHIB7 Transcription Factor, PDB code: 7kim:

Magnesium binding site 1 out of 1 in 7kim

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Magnesium Binding Sites List in 7kim

Magnesium binding site 1 out of 1 in the Mycobacterium Tuberculosis Wt Rnap Transcription Closed Promoter Complex with WHIB7 Transcription Factor

Mono view

Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Mycobacterium Tuberculosis Wt Rnap Transcription Closed Promoter Complex with WHIB7 Transcription Factor within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
D:Mg2002 b:118.0 occ:1.00	OD1	D:ASP537	2.0	107.6	1.0
	OD1	D:ASP535	2.1	109.5	1.0
	OD2	D:ASP535	2.1	109.5	1.0
	OD1	D:ASP539	2.1	111.1	1.0
	OD2	D:ASP539	2.2	111.1	1.0
	OD2	D:ASP537	2.2	107.6	1.0
	CG	D:ASP535	2.3	109.5	1.0
	CG	D:ASP537	2.4	107.6	1.0
	CG	D:ASP539	2.5	111.1	1.0
	CB	D:ASP535	3.8	109.5	1.0
	CB	D:ASP537	3.9	107.6	1.0
	CB	D:ASP539	4.0	111.1	1.0
	N	D:ASP537	4.4	107.6	1.0
	N	D:ASP535	4.5	109.5	1.0
	CA	D:ASP535	4.6	109.5	1.0
	CA	D:ASP537	4.6	107.6	1.0
	N	D:ASP539	4.7	111.1	1.0
	NH2	D:ARG500	4.7	100.8	1.0
	C	D:ASP535	4.7	109.5	1.0
	CA	D:ASP539	4.8	111.1	1.0
	C	D:ASP537	4.9	107.6	1.0

Reference:

M.Lilic, S.A.Darst, E.A.Campbell. Mycobacterium Tuberculosis Wt Rnap Transcription Closed Promoter Complex with WHIB7 Transcription Factor To Be Published.

Page generated: Thu Aug 14 08:13:40 2025

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