Magnesium in PDB 8dy7: Streptomyces Venezuelae Rnap Transcription Open Promoter Complex with Whia and Whib Transcription Factors

Enzymatic activity of Streptomyces Venezuelae Rnap Transcription Open Promoter Complex with Whia and Whib Transcription Factors

All present enzymatic activity of Streptomyces Venezuelae Rnap Transcription Open Promoter Complex with Whia and Whib Transcription Factors:
2.7.7.6;

Other elements in 8dy7:

The structure of Streptomyces Venezuelae Rnap Transcription Open Promoter Complex with Whia and Whib Transcription Factors also contains other interesting chemical elements:

Zinc	(Zn)	3 atoms
Iron	(Fe)	4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Streptomyces Venezuelae Rnap Transcription Open Promoter Complex with Whia and Whib Transcription Factors (pdb code 8dy7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Streptomyces Venezuelae Rnap Transcription Open Promoter Complex with Whia and Whib Transcription Factors, PDB code: 8dy7:

Magnesium binding site 1 out of 1 in 8dy7

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Magnesium Binding Sites List in 8dy7

Magnesium binding site 1 out of 1 in the Streptomyces Venezuelae Rnap Transcription Open Promoter Complex with Whia and Whib Transcription Factors

Mono view

Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Streptomyces Venezuelae Rnap Transcription Open Promoter Complex with Whia and Whib Transcription Factors within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
D:Mg2002 b:25.4 occ:1.00	OD1	D:ASP537	2.0	23.9	1.0
	OD2	D:ASP537	2.2	23.9	1.0
	HB3	D:ASP535	2.3	20.9	1.0
	CG	D:ASP537	2.4	23.9	1.0
	HB2	D:ASP535	3.0	20.9	1.0
	CB	D:ASP535	3.1	20.9	1.0
	OD1	D:ASP539	3.3	25.0	1.0
	OD2	D:ASP539	3.5	25.0	1.0
	H	D:ASP537	3.7	23.9	1.0
	OD2	D:ASP535	3.7	20.9	1.0
	CG	D:ASP539	3.8	25.0	1.0
	CG	D:ASP535	3.8	20.9	1.0
	CB	D:ASP537	3.9	23.9	1.0
	H	D:ASP535	4.2	20.9	1.0
	HB3	D:ASP537	4.3	23.9	1.0
	CA	D:ASP535	4.3	20.9	1.0
	HB2	D:ASP537	4.4	23.9	1.0
	N	D:ASP537	4.4	23.9	1.0
	CA	D:ASP537	4.6	23.9	1.0
	C	D:ASP535	4.6	20.9	1.0
	N	D:ASP535	4.7	20.9	1.0
	C	D:ASP537	4.8	23.9	1.0
	O	D:ASP535	4.8	20.9	1.0
	OD1	D:ASP535	4.9	20.9	1.0

Reference:

M.Lilic, E.A.Campbell. Streptomyces Venezuelae Rnap Transcription Open Promoter Complex with Whia and Whib Transcription Factors To Be Published.

Page generated: Fri Oct 4 00:58:42 2024

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