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Magnesium in PDB 8rz8: Mutsbeta-Atpgs with Straight MSH2 Clamp

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Mutsbeta-Atpgs with Straight MSH2 Clamp (pdb code 8rz8). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Mutsbeta-Atpgs with Straight MSH2 Clamp, PDB code: 8rz8:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 8rz8

Go back to Magnesium Binding Sites List in 8rz8
Magnesium binding site 1 out of 2 in the Mutsbeta-Atpgs with Straight MSH2 Clamp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Mutsbeta-Atpgs with Straight MSH2 Clamp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg2000

b:26.2
occ:1.00
OG A:SER676 2.0 58.7 1.0
O2G A:AGS2001 2.1 44.7 1.0
O2B A:AGS2001 2.5 41.5 1.0
OD2 A:ASP748 2.9 76.6 1.0
OD1 A:ASP748 3.3 80.5 1.0
PG A:AGS2001 3.4 40.6 1.0
CB A:SER676 3.4 57.5 1.0
O3B A:AGS2001 3.5 37.6 1.0
CG A:ASP748 3.5 75.4 1.0
PB A:AGS2001 3.5 37.1 1.0
OG B:SER950 3.9 58.5 1.0
N A:SER676 4.0 56.2 1.0
CA A:SER676 4.1 55.4 1.0
OG1 B:THR951 4.1 47.5 1.0
O3G A:AGS2001 4.2 43.6 1.0
O1A A:AGS2001 4.5 41.4 1.0
O1B A:AGS2001 4.5 39.4 1.0
O3A A:AGS2001 4.6 37.3 1.0
CG2 B:THR951 4.7 48.8 1.0
CB A:LYS675 4.8 55.8 1.0
S1G A:AGS2001 4.8 55.7 1.0
OD2 B:ASP943 4.8 104.6 0.0
O A:ASP748 4.9 68.1 1.0
NZ A:LYS675 4.9 62.3 1.0
CB A:ASP748 5.0 64.8 1.0
PA A:AGS2001 5.0 37.9 1.0

Magnesium binding site 2 out of 2 in 8rz8

Go back to Magnesium Binding Sites List in 8rz8
Magnesium binding site 2 out of 2 in the Mutsbeta-Atpgs with Straight MSH2 Clamp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Mutsbeta-Atpgs with Straight MSH2 Clamp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg2000

b:25.2
occ:1.00
OG B:SER903 1.7 50.4 1.0
O2G B:AGS2001 2.2 35.6 1.0
O2B B:AGS2001 2.6 35.4 1.0
CB B:SER903 3.0 46.4 1.0
OD2 B:ASP975 3.2 82.2 1.0
PG B:AGS2001 3.5 33.2 1.0
O3B B:AGS2001 3.7 33.5 1.0
PB B:AGS2001 3.8 35.1 1.0
N B:SER903 3.8 37.8 1.0
OD1 B:ASP975 3.9 82.3 1.0
CA B:SER903 3.9 40.1 1.0
CG B:ASP975 3.9 78.0 1.0
OG A:SER723 3.9 64.0 1.0
O1A B:AGS2001 4.0 34.0 1.0
OG1 A:THR724 4.0 48.7 1.0
CG2 A:THR724 4.1 49.1 1.0
O3G B:AGS2001 4.3 36.5 1.0
OE1 B:GLU976 4.3 99.1 0.0
OE2 B:GLU976 4.3 97.7 0.0
CD B:GLU976 4.5 96.9 0.0
OD2 A:ASP716 4.6 115.6 0.0
O3A B:AGS2001 4.7 33.4 1.0
CB A:THR724 4.7 46.4 1.0
PA B:AGS2001 4.8 31.3 1.0
CB B:LYS902 4.9 40.4 1.0
O1B B:AGS2001 4.9 36.6 1.0
C B:LYS902 4.9 38.2 1.0
N A:THR724 5.0 44.4 1.0

Reference:

J.-H.Lee, M.Thomsen, H.Daub, S.Steinbacher, A.Sztyler, G.Thieulin-Pardo, T.Neudegger, N.Plotnikov, R.R.Iyer, H.Wilkinson, E.Monteagudo, D.P.Felsenfeld, T.Haque, M.Finley, C.Dominguez, T.F.Vogt, B.C.Prasad. Mutsbeta-Atpgs Complex with Straight MSH2 Clamp To Be Published.
Page generated: Fri Aug 15 14:20:18 2025

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