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Magnesium in PDB, part 51 (files: 2001-2040), PDB 1xyc-1yd1

Experimental structures of coordination spheres of Magnesium (Mg) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Magnesium atoms. PDB files: 2001-2040 (PDB 1xyc-1yd1).
  1. 1xyc (Mg: 6) - X-Ray Crystallographic Structures of D-Xylose Isomerase- Substrate Complexes Position the Substrate and Provide Evidence For Metal Movement During Catalysis
  2. 1xyl (Mg: 2) - The Role of the Divalent Metal Ion in Sugar Binding, Ring Opening, and Isomerization By D-Xylose Isomerase: Replacement of A Catalytic Metal By An Amino-Acid
  3. 1xym (Mg: 2) - The Role of the Divalent Metal Ion in Sugar Binding, Ring Opening, and Isomerization By D-Xylose Isomerase: Replacement of A Catalytic Metal By An Amino-Acid
  4. 1xz8 (Mg: 2) - Pyrr, the Regulator of the Pyrimidine Biosynthetic Operon in Bacillus Caldolyticus, Nucleotide-Bound Form
  5. 1xzn (Mg: 2) - Pyrr, the Regulator of the Pyrimidine Biosynthetic Operon in Bacillus Caldolyticus, Sulfate-Bound Form
  6. 1y07 (Mg: 2) - Crystal Structure of the Superoxide Reductase From Treponema Pallidum
    Other atoms: Fe (5);
  7. 1y0q (Mg: 4) - Crystal Structure of An Active Group I Ribozyme-Product Complex
  8. 1y0v (Mg: 6) - Crystal Structure of Anthrax Edema Factor (Ef) in Complex with Calmodulin and Pyrophosphate
    Other atoms: Ca (18);
  9. 1y1v (Mg: 1) - Refined Rna Polymerase II-Tfiis Complex
    Other atoms: Zn (9);
  10. 1y1w (Mg: 1) - Complete Rna Polymerase II Elongation Complex
    Other atoms: Zn (8);
  11. 1y23 (Mg: 1) - Crystal Structure of A Member of Hit Family of Proteins From Bacillus Subtilis
    Other atoms: Zn (5);
  12. 1y26 (Mg: 5) - A-Riboswitch-Adenine Complex
  13. 1y2b (Mg: 2) - Catalytic Domain of Human Phosphodiesterase 4D in Complex with 3,5-Dimethyl-1H-Pyrazole-4-Carboxylic Acid Ethyl Ester
    Other atoms: Zn (2);
  14. 1y2c (Mg: 2) - Catalytic Domain of Human Phosphodiesterase 4D in Complex with 3,5-Dimethyl-1-Phenyl-1H-Pyrazole-4-Carboxylic Acid Ethyl Ester
    Other atoms: Zn (2);
  15. 1y2d (Mg: 2) - Catalytic Domain of Human Phosphodiesterase 4D in Complex with 1-(4-Methoxy-Phenyl)-3,5-Dimethyl-1H-Pyrazole-4- Carboxylic Acid Ethyl Ester
    Other atoms: Zn (2);
  16. 1y2e (Mg: 2) - Catalytic Domain of Human Phosphodiesterase 4D in Complex with 1-(4-Amino-Phenyl)-3,5-Dimethyl-1H-Pyrazole-4- Carboxylic Acid Ethyl Ester
    Other atoms: Zn (2);
  17. 1y2h (Mg: 2) - Catalytic Domain of Human Phosphodiesterase 4B in Complex with 1-(2-Chloro-Phenyl)-3,5-Dimethyl-1H-Pyrazole-4- Carboxylic Acid Ethyl Ester
    Other atoms: Cl (2); Zn (2);
  18. 1y2j (Mg: 2) - Catalytic Domain of Human Phosphodiesterase 4B in Complex with 3,5-Dimethyl-1-(3-Nitro-Phenyl)-1H-Pyrazole-4- Carboxylic Acid Ethyl Ester
    Other atoms: Zn (2);
  19. 1y2k (Mg: 2) - Catalytic Domain of Human Phosphodiesterase 4D in Complex with 3,5-Dimethyl-1-(3-Nitro-Phenyl)-1H-Pyrazole-4- Carboxylic Acid Ethyl Ester
    Other atoms: Zn (2);
  20. 1y37 (Mg: 2) - Structure of Fluoroacetate Dehalogenase From Burkholderia Sp. FA1
  21. 1y39 (Mg: 18) - Co-Evolution of Protein and Rna Structures Within A Highly Conserved Ribosomal Domain
    Other atoms: Co (2); K (2);
  22. 1y3s (Mg: 2) - Hiv-1 Dis Rna Subtype F- Mpd Form
    Other atoms: Br (2); K (3);
  23. 1y4s (Mg: 2) - Conformation Rearrangement of Heat Shock Protein 90 Upon Adp Binding
  24. 1y73 (Mg: 8) - Hiv-1 Dis(Mal) Duplex Pt-Soaked
    Other atoms: Pt (2);
  25. 1y77 (Mg: 1) - Complete Rna Polymerase II Elongation Complex with Substrate Analogue Gmpcpp
    Other atoms: Zn (8);
  26. 1y84 (Mg: 1) - Crystal Structure of the A-Dna Gcgtat*Cgc with A 2'-O-[2- (Imidazolyl)Ethyl] Thymidine (T*)
  27. 1y8a (Mg: 1) - Structure of Gene Product AF1437 From Archaeoglobus Fulgidus
  28. 1y8l (Mg: 1) - Crystal Structure of the A-Dna Gcgtat*Cgc with A 2'-O-[2- (Trifluoro)Ethyl] Thymidine (T*)
    Other atoms: F (6);
  29. 1y8o (Mg: 1) - Crystal Structure of the PDK3-L2 Complex
    Other atoms: K (2);
  30. 1y8p (Mg: 1) - Crystal Structure of the PDK3-L2 Complex
    Other atoms: K (2);
  31. 1y8q (Mg: 2) - Sumo E1 Activating Enzyme SAE1-SAE2-Mg-Atp Complex
    Other atoms: Zn (2);
  32. 1y8r (Mg: 2) - Sumo E1 Activating Enzyme SAE1-SAE2-SUMO1-Mg-Atp Complex
    Other atoms: Zn (2);
  33. 1y95 (Mg: 10) - Hiv-1 Dis(Mal) Duplex Pb-Soaked
    Other atoms: Pb (3);
  34. 1y99 (Mg: 7) - Hiv-1 Subtype A Dis Rna Duplex
  35. 1y9a (Mg: 2) - Alcohol Dehydrogenase From Entamoeba Histolotica in Complex with Cacodylate
    Other atoms: As (2); Zn (4);
  36. 1y9d (Mg: 4) - Pyruvate Oxidase Variant V265A From Lactobacillus Plantarum
    Other atoms: Na (2);
  37. 1y9i (Mg: 4) - Crystal Structure of Low Temperature Requirement C Protein From Listeria Monocytogenes
    Other atoms: Ca (4);
  38. 1yag (Mg: 1) - Structure of the Yeast Actin-Human Gelsolin Segment 1 Complex
    Other atoms: Ca (1);
  39. 1ybh (Mg: 1) - Crystal Structure of Arabidopsis Thaliana Acetohydroxyacid Synthase in Complex with A Sulfonylurea Herbicide Chlorimuron Ethyl
    Other atoms: Cl (1);
  40. 1yd1 (Mg: 2) - Crystal Structure of the Giy-Yig N-Terminal Endonuclease Domain of Uvrc From Thermotoga Maritima Bound to Its Catalytic Divalent Cation: Magnesium
Page generated: Sat Apr 17 16:19:35 2021

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