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Magnesium in PDB 3ef1: The Structure of FCP1, An Essential Rna Polymerase II Ctd Phosphatase

Enzymatic activity of The Structure of FCP1, An Essential Rna Polymerase II Ctd Phosphatase

All present enzymatic activity of The Structure of FCP1, An Essential Rna Polymerase II Ctd Phosphatase:
3.1.3.16;

Protein crystallography data

The structure of The Structure of FCP1, An Essential Rna Polymerase II Ctd Phosphatase, PDB code: 3ef1 was solved by A.Ghosh, C.D.Lima, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.15
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 53.663, 88.442, 113.170, 90.00, 90.00, 90.00
R / Rfree (%) 21.1 / 23.4

Other elements in 3ef1:

The structure of The Structure of FCP1, An Essential Rna Polymerase II Ctd Phosphatase also contains other interesting chemical elements:

Fluorine (F) 3 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Structure of FCP1, An Essential Rna Polymerase II Ctd Phosphatase (pdb code 3ef1). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Structure of FCP1, An Essential Rna Polymerase II Ctd Phosphatase, PDB code: 3ef1:

Magnesium binding site 1 out of 1 in 3ef1

Go back to Magnesium Binding Sites List in 3ef1
Magnesium binding site 1 out of 1 in the The Structure of FCP1, An Essential Rna Polymerase II Ctd Phosphatase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Structure of FCP1, An Essential Rna Polymerase II Ctd Phosphatase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1

b:34.2
occ:1.00
 OD1 A:ASP298 2.1 30.3 1.0
O A:HOH622 2.1 27.7 1.0
O A:HOH623 2.2 27.5 1.0
F2 A:BFD170 2.3 26.5 1.0
O A:ASP172 2.3 30.8 1.0
OD2 A:BFD170 2.3 27.1 1.0
CG A:ASP298 3.0 31.1 1.0
OD2 A:ASP298 3.2 31.9 1.0
CG A:BFD170 3.3 27.6 1.0
BE A:BFD170 3.4 28.3 1.0
C A:ASP172 3.4 30.7 1.0
OD1 A:BFD170 3.7 26.9 1.0
OD1 A:ASP297 3.8 28.4 1.0
OG1 A:THR174 4.1 26.4 1.0
O A:HOH620 4.1 32.7 1.0
CA A:ASP172 4.2 30.7 1.0
CB A:ASP172 4.2 32.8 1.0
F3 A:BFD170 4.3 27.4 1.0
F1 A:BFD170 4.3 25.5 1.0
CB A:ASP298 4.4 28.7 1.0
N A:ASP172 4.4 29.6 1.0
CB A:GLN173 4.5 29.0 1.0
OD1 A:ASP323 4.5 66.5 1.0
CG A:ARG299 4.5 32.9 1.0
N A:GLN173 4.5 29.0 1.0
CD A:ARG299 4.5 37.6 1.0
N A:ASP298 4.5 26.8 1.0
CB A:BFD170 4.5 23.2 1.0
CG A:ASP297 4.7 29.8 1.0
O A:HOH621 4.7 77.9 1.0
CA A:GLN173 4.8 29.1 1.0
C A:GLN173 4.8 28.2 1.0
N A:THR174 4.8 27.4 1.0
N A:ARG299 4.9 28.0 1.0
OD2 A:ASP297 5.0 29.5 1.0
CA A:ASP298 5.0 28.5 1.0
C A:LEU171 5.0 29.4 1.0

Reference:

A.Ghosh, S.Shuman, C.D.Lima. The Structure of FCP1, An Essential Rna Polymerase II Ctd Phosphatase. Mol.Cell V. 32 478 2008.
ISSN: ISSN 1097-2765
PubMed: 19026779
DOI: 10.1016/J.MOLCEL.2008.09.021
Page generated: Wed Aug 14 13:02:06 2024

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