Magnesium in PDB 6ll2: Crystal Structure of Glucose Isomerase By Fixed-Target Serial Femtosecond Crystallography

All present enzymatic activity of Crystal Structure of Glucose Isomerase By Fixed-Target Serial Femtosecond Crystallography:
5.3.1.5;

The structure of Crystal Structure of Glucose Isomerase By Fixed-Target Serial Femtosecond Crystallography, PDB code: 6ll2 was solved by K.H.Nam, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	70.62 / 1.75
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	92.630, 98.230, 101.607, 90.00, 90.00, 90.00
R / Rfree (%)	17.2 / 19.7

The binding sites of Magnesium atom in the Crystal Structure of Glucose Isomerase By Fixed-Target Serial Femtosecond Crystallography (pdb code 6ll2). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Glucose Isomerase By Fixed-Target Serial Femtosecond Crystallography, PDB code: 6ll2:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of Glucose Isomerase By Fixed-Target Serial Femtosecond Crystallography


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Glucose Isomerase By Fixed-Target Serial Femtosecond Crystallography within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg401 b:2.3 occ:1.00 OE1 A:GLU217 2.1 11.2 1.0 OD2 A:ASP255 2.1 16.0 1.0 O A:HOH752 2.1 14.4 1.0 OD1 A:ASP257 2.3 12.1 1.0 OD1 A:ASP255 2.4 13.0 1.0 NE2 A:HIS220 2.5 9.0 1.0 CG A:ASP255 2.6 15.6 1.0 CD2 A:HIS220 3.0 3.2 1.0 CD A:GLU217 3.2 5.0 1.0 CG A:ASP257 3.2 7.9 1.0 OD2 A:ASP257 3.4 14.4 1.0 O A:HOH800 3.6 17.4 1.0 CE1 A:HIS220 3.6 5.3 1.0 OE2 A:GLU217 3.7 13.8 1.0 ND2 A:ASN247 3.9 8.4 1.0 CB A:ASP255 4.1 6.9 1.0 O A:HOH578 4.2 8.0 1.0 CG A:HIS220 4.2 3.2 1.0 CG A:GLU217 4.3 5.5 1.0 O A:HOH569 4.4 50.9 1.0 ND1 A:HIS220 4.5 4.7 1.0 OD2 A:ASP287 4.6 15.0 1.0 CB A:ASP257 4.6 5.9 1.0 O A:HOH712 4.6 27.5 1.0 CE A:LYS183 4.7 5.6 1.0 O A:HOH635 4.7 34.0 1.0 NZ A:LYS183 4.7 8.2 1.0 MG A:MG402 4.9 9.6 1.0 CA A:ASP257 4.9 3.5 1.0 N A:ASP257 5.0 2.4 1.0 CA A:ASP255 5.0 4.3 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of Glucose Isomerase By Fixed-Target Serial Femtosecond Crystallography


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Glucose Isomerase By Fixed-Target Serial Femtosecond Crystallography within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:9.6 occ:1.00 OE2 A:GLU181 1.8 36.5 1.0 OE2 A:GLU217 1.9 13.8 1.0 OD2 A:ASP287 2.1 15.0 1.0 OD2 A:ASP245 2.3 12.6 1.0 O A:HOH712 2.5 27.5 1.0 CD A:GLU181 2.8 19.9 1.0 O A:HOH563 2.9 32.4 1.0 CG A:ASP287 3.1 11.6 1.0 CD A:GLU217 3.2 5.0 1.0 OE1 A:GLU181 3.2 15.2 1.0 CG A:ASP245 3.4 12.4 1.0 CB A:ASP287 3.6 5.7 1.0 O A:HOH613 3.6 17.1 1.0 O A:HOH752 3.9 14.4 1.0 CB A:ASP245 3.9 5.7 1.0 OE1 A:GLU217 4.0 11.2 1.0 CE1 A:HIS220 4.0 5.3 1.0 CG A:GLU181 4.1 5.1 1.0 CG A:GLU217 4.1 5.5 1.0 CB A:GLU217 4.2 6.9 1.0 OD1 A:ASP287 4.2 7.6 1.0 OD1 A:ASP245 4.4 10.9 1.0 O A:HOH569 4.4 50.9 1.0 NE2 A:HIS220 4.5 9.0 1.0 ND1 A:HIS220 4.8 4.7 1.0 ND2 A:ASN215 4.9 8.0 1.0 MG A:MG401 4.9 2.3 1.0 O A:HOH800 5.0 17.4 1.0

K.H.Nam, K.H.Nam. N/A N/A.