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Magnesium in PDB, part 325 (files: 12961-13000), PDB 5vp1-5vw9

Experimental structures of coordination spheres of Magnesium (Mg) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Magnesium atoms. PDB files: 12961-13000 (PDB 5vp1-5vw9).
  1. 5vp1 (Mg: 4) - Discovery of Clinical Candidate N-{(1S)-1-[3-Fluoro-4- (Trifluoromethoxy)Phenyl]-2-Methoxyethyl}-7-Methoxy-2-Oxo-2,3- Dihydropyrido[2,3-B]Pyrazine-4(1H)-Carboxamide (Tak-915), A Highly Potent, Selective, and Brain-Penetrating Phosphodiesterase 2A Inhibitor For the Treatment of Cognitive Disorders
    Other atoms: F (9); Zn (3);
  2. 5vp7 (Mg: 2) - Crystal Structure of Human Kras G12A Mutant in Complex with Gdp
    Other atoms: Na (2);
  3. 5vpi (Mg: 2) - Crystal Structure of Human Kras G12A Mutant in Complex with Gtp
  4. 5vpy (Mg: 2) - Crystal Structure of Human Kras G12A Mutant in Complex with Gppnhp
  5. 5vpz (Mg: 2) - Crystal Structure of Human Kras G12A Mutant in Complex with Gtp-Gamma- S
  6. 5vq0 (Mg: 2) - Crystal Structure of Human Kras G12A Mutant in Complex with Gdp (Edta Soaked)
  7. 5vq1 (Mg: 2) - Crystal Structure of Human Kras Q61A Mutant in Complex with Gdp
  8. 5vq2 (Mg: 2) - Crystal Structure of Human Wt-Kras in Complex with Gtp
  9. 5vq6 (Mg: 2) - Crystal Structure of Human Wt-Kras in Complex with Gtp-Gamma-S
  10. 5vq8 (Mg: 2) - Crystal Structure of Human Wt-Kras in Complex with Gdp (Edta Soaked)
  11. 5vr7 (Mg: 2) - Aba-Mimicking Ligand AMF1ALPHA in Complex with Aba Receptor PYL2 and PP2C HAB1
    Other atoms: F (1);
  12. 5vrh (Mg: 1) - Apolipoprotein N-Acyltransferase C387S Active Site Mutant
    Other atoms: Cl (1);
  13. 5vrj (Mg: 2) - 2009 H1N1 Pa Endonuclease in Complex with Ro-7 and Magnesium
    Other atoms: F (3);
  14. 5vro (Mg: 3) - Aba-Mimicking Ligand AMF1BETA in Complex with Aba Receptor PYL2 and PP2C HAB1
    Other atoms: F (1);
  15. 5vry (Mg: 6) - Human Dna Polymerase Beta 8-Oxog:Dc Extension with Dttp After 20 S
    Other atoms: Cl (1);
  16. 5vrz (Mg: 5) - Human Dna Polymerase Beta 8-Oxog:Dc Extension with Dttp After 60 S
    Other atoms: Cl (2); Na (1);
  17. 5vs0 (Mg: 6) - Human Dna Polymerase Beta 8-Oxog:Dc Extension with Dttp After 80 S
    Other atoms: Cl (2);
  18. 5vs3 (Mg: 6) - Human Dna Polymerase Beta 8-Oxog:Da Extension with Dttp After 90 S
    Other atoms: Na (1);
  19. 5vs4 (Mg: 6) - Human Dna Polymerase Beta 8-Oxog:Da Extension with Dttp After 120 S
  20. 5vs5 (Mg: 2) - Aba-Mimicking Ligand AMF2ALPHA in Complex with Aba Receptor PYL2 and PP2C HAB1
    Other atoms: F (2);
  21. 5vsq (Mg: 3) - Aba-Mimicking Ligand AMF2BETA in Complex with Aba Receptor PYL2 and PP2C HAB1
    Other atoms: F (2);
  22. 5vsr (Mg: 3) - Aba-Mimicking Ligand AMF4 in Complex with Aba Receptor PYL2 and PP2C HAB1
    Other atoms: F (4);
  23. 5vsw (Mg: 2) - X-Ray Crystal Structure of Escherichia Coli Rna Polymerase and Dksa/Ppgpp Complex
    Other atoms: Zn (5);
  24. 5vt0 (Mg: 1) - Escherichia Coli 6S Rna Derivative in Complex with Escherichia Coli Rna Polymerase SIGMA70-Holoenzyme
    Other atoms: Zn (2);
  25. 5vt1 (Mg: 1) - Crystal Structure of the Human CAMKK2B Bound to A Thiadiazinone Benzamide Inhibitor
  26. 5vt7 (Mg: 3) - Aba-Mimicking Ligand AMC1BETA in Complex with Aba Receptor PYL2 and PP2C HAB1
    Other atoms: Cl (1);
  27. 5vtp (Mg: 2) - X-Ray Diffraction Data of Dna Polymerase Eta (RAD30) of Saccharomyces Cerevisiae with A Single Magnesium Bound in Absence of Dna and Incoming Dntp
  28. 5vu7 (Mg: 1) - Tna Polymerase, Open Ternary Complex
  29. 5vu8 (Mg: 3) - Tna Polymerase, Closed Ternary Complex
  30. 5vvr (Mg: 1) - Ternary Complex of Rna Pol II, Transcription Scaffold and RAD26
    Other atoms: Zn (8);
  31. 5vvs (Mg: 1) - Rna Pol II Elongation Complex
    Other atoms: Zn (8);
  32. 5vw1 (Mg: 1) - Crystal Structure of SPYCAS9-Sgrna-ACRIIA4 Ternary Complex
  33. 5vw2 (Mg: 1) - Nadph Soak of Y316S Mutant of Corn Root Ferredoxin:Nadp+ Reductase
  34. 5vw3 (Mg: 1) - Nadp+ Soak of Y316S Mutant of Corn Root Ferredoxin:Nadp+ Reductase
  35. 5vw4 (Mg: 1) - Nicotinamide Soak of Y316S Mutant of Corn Root Ferredoxin:Nadp+ Reductase
  36. 5vw5 (Mg: 1) - Nicotinamide Soak of Y316A Mutant of Corn Root Ferredoxin:Nadp+ Reductase
  37. 5vw6 (Mg: 1) - Nadp+ Soak of Y316A Mutant of Corn Root Ferredoxin:Nadp+ Reductase
  38. 5vw7 (Mg: 1) - Nadph Soak of Y316A Mutant of Corn Root Ferredoxin:Nadp+ Reductase
  39. 5vw8 (Mg: 1) - Nadp+ Soak of Y316S Mutant of Corn Root Ferredoxin:Nadp+ Reductase in Alternate Space Group
  40. 5vw9 (Mg: 1) - Nicotinamide Soak of Y316S Mutant of Corn Root Ferredoxin:Nadp+ Reductase in Alternate Space Group
Page generated: Tue Feb 25 10:35:05 2025

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