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Magnesium in PDB, part 317 (files: 12641-12680), PDB 5v1p-5vn4

Experimental structures of coordination spheres of Magnesium (Mg) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Magnesium atoms. PDB files: 12641-12680 (PDB 5v1p-5vn4).
  1. 5v1p (Mg: 2) - Dna Polymerase Beta Substrate Complex with 8-Oxog:C at the Primer Terminus and Incoming Dctp Analog
    Other atoms: Cl (4); Na (2);
  2. 5v1r (Mg: 3) - Dna Polymerase Beta Reactant Complex with 8-Oxog:C at the Primer Terminus and Incoming Dctp
    Other atoms: Cl (4); Na (2);
  3. 5v2c (Mg: 74) - Re-Refinement of Crystal Structure of Photosystem II Complex
    Other atoms: Mn (8); Fe (6); Ca (8); Cl (6);
  4. 5v2h (Mg: 1) - Rna Octamer Containing Glycol Nucleic Acid, Sgnt
    Other atoms: Co (1); Br (4);
  5. 5v33 (Mg: 4) - R. Sphaeroides Photosythetic Reaction Center Mutant - Residue L223, Ser to Trp - Room Temperature Structure Solved on X-Ray Transparent Microfluidic Chip
    Other atoms: Fe (1);
  6. 5v3j (Mg: 2) - MOUSEZFP568-ZNF1-10 in Complex with Dna
    Other atoms: Zn (20);
  7. 5v60 (Mg: 2) - Phospho-ERK2 Bound to Amp-Pcp
  8. 5v6s (Mg: 1) - Crystal Structure of Small Molecule Acrylamide 1 Covalently Bound to K-Ras G12C
    Other atoms: F (1); Cl (1);
  9. 5v71 (Mg: 6) - Kras G12C in Bound to Quinazoline Based Switch II Pocket (Swiip) Binder
    Other atoms: F (6); Cl (6);
  10. 5v7m (Mg: 1) - Pcna Mutant L126A/I128A Protein Defective in Gene Silencing
  11. 5v7n (Mg: 7) - Crystal Structure of Nadph-Dependent Glyoxylate/Hydroxypyruvate Reductase SMC04462 (Smghrb) From Sinorhizobium Meliloti in Complex with Nadp and 2-Keto-D-Gluconic Acid
    Other atoms: Cl (7); Na (4);
  12. 5v8k (Mg: 30) - Homodimeric Reaction Center of H. Modesticaldum
    Other atoms: Fe (4); Ca (2);
  13. 5v8t (Mg: 1) - Crystal Structure of Smt Fusion Peptidyl-Prolyl Cis-Trans Isomerase From Burkholderia Pseudomallei Complexed with SF354
  14. 5v8x (Mg: 4) - Mutant Structures of Streptococcus Agalactiae Gbs Glyceraldehyde-3- Phosphate Dehydrogenase (Gapdh)
  15. 5v8y (Mg: 1) - Mutant Structures of Streptococcus Agalactiae Gbs Glyceraldehyde-3- Phosphate Dehydrogenase (Gapdh)
  16. 5v9l (Mg: 3) - Kras G12C in Bound to Quinazoline Based Switch II Pocket (Swiip) Binder
    Other atoms: F (3); Cl (3);
  17. 5v9o (Mg: 1) - Kras G12C Inhibitor
    Other atoms: Cl (1);
  18. 5v9x (Mg: 1) - Structure of Mycobacterium Smegmatis Helicase Lhr Bound to Ssdna and Amp-Pnp
  19. 5vaj (Mg: 4) - Bhrnase H - Amide-Rna/Dna Complex
  20. 5vbe (Mg: 1) - Crystal Structure of Small Molecule Disulfide 2C07 Bound to H-Ras M72C Gdp
    Other atoms: F (3);
  21. 5vbi (Mg: 2) - Crystal Structure of the R515W Missense Variant of Human PGM1
  22. 5vbm (Mg: 1) - Crystal Structure of Small Molecule Disulfide 2C07 Bound to K-Ras Cys Light M72C Gdp
    Other atoms: F (3);
  23. 5vbz (Mg: 3) - Crystal Structure of Small Molecule Disulfide 2C07 Bound to H-Ras M72C Gppnhp
    Other atoms: F (3);
  24. 5vcp (Mg: 3) - Crystal Structure of A Peptide Deformylase From Burkholderia Xenovorans in Complex with Actinonin
    Other atoms: Fe (4);
  25. 5vcu (Mg: 2) - Crystal Structure of Ras-Related C3 Botulinum Toxin Substrate 1 Isoform X2 From Naegleria Fowleri in Complex with Gdp
  26. 5vec (Mg: 2) - Crystal Structure of the R515L Missense Variant of Human PGM1
  27. 5vez (Mg: 1) - Dna Polymerase Beta Substrate Complex with 8-Oxog:A at the Primer Terminus and Incoming Dctp Analog
    Other atoms: Na (3);
  28. 5vf2 (Mg: 1) - Scfv 2D10 Re-Refined As A Complex with Trehalose Replacing the Original Alpha-1,6-Mannobiose
  29. 5vg7 (Mg: 2) - Crystal Structure of the R503Q Missense Variant of Human PGM1
  30. 5vgt (Mg: 1) - X-Ray Structure of Bacteriophage SF6 Tail Adaptor Protein GP7
    Other atoms: Ca (4);
  31. 5vhc (Mg: 1) - DHX36 with An N-Terminal Truncation Bound to Adp-BEF3
    Other atoms: F (3);
  32. 5vi8 (Mg: 1) - Structure of A Mycobacterium Smegmatis Transcription Initiation Complex with An Upstream-Fork Promoter Fragment
    Other atoms: Zn (2);
  33. 5vj3 (Mg: 1) - Hiv Protease (Pr) in Open Form with MG2+ in Active Site and Hive-9 in Eye Site
    Other atoms: F (3);
  34. 5vj7 (Mg: 1) - Ferredoxin Nadp Oxidoreductase (Xfn)
    Other atoms: Fe (10);
  35. 5vj9 (Mg: 1) - Guanidine-II Riboswitch P2 Hairpin Dimer From Pseudomonas Aeruginosa
    Other atoms: K (1);
  36. 5vjb (Mg: 1) - Guanidine-II Riboswitch P2 Hairpin Dimer with 5-Bromou Substitution From Pseudomonas Aeruginosa
    Other atoms: Br (4);
  37. 5vk4 (Mg: 2) - Crystal Structure of A Phosphoribosylformylglycinamidine Cyclo-Ligase From Neisseria Gonorrhoeae Bound to Amppnp and Magnesium
  38. 5vkw (Mg: 2) - Crystal Structure of Adenylosuccinate Lyase ADE13 From Candida Albicans
    Other atoms: Cl (8); Ca (2);
  39. 5vm2 (Mg: 2) - Crystal Structure of ECK1772, An Oxidoreductase/Dehydrogenase of Unknown Specificity Involved in Membrane Biogenesis From Escherichia Coli
    Other atoms: Cl (1); Zn (2);
  40. 5vn4 (Mg: 1) - Crystal Structure of Adenine Phosphoribosyl Transferase From Trypanosoma Brucei in Complex with Amp, Pyrophosphate, and Ribose-5- Phosphate
Page generated: Sat May 14 02:47:59 2022

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