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Magnesium in PDB, part 520 (files: 20761-20800), PDB 8dr3-8dzt

Experimental structures of coordination spheres of Magnesium (Mg) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Magnesium atoms. PDB files: 20761-20800 (PDB 8dr3-8dzt).
  1. 8dr3 (Mg: 4) - Closed State of Rfc:Pcna Bound to A 3' Ss/Dsdna Junction (DNA2) with Ntd
  2. 8dr4 (Mg: 4) - Open State of Rfc:Pcna Bound to A 3' Ss/Dsdna Junction (DNA2) Without Ntd
  3. 8dr5 (Mg: 4) - Open State of Rfc:Pcna Bound to A 3' Ss/Dsdna Junction (DNA2) with Ntd
  4. 8dr6 (Mg: 4) - Closed State of Rfc:Pcna Bound to A Nicked Dsdna
  5. 8dr7 (Mg: 4) - Open State of Rfc:Pcna Bound to A Nicked Dsdna
  6. 8dsw (Mg: 1) - Crystal Structure of Egfr Kinase Domain, EXON20 Insertion Fqea Mutant
  7. 8dte (Mg: 1) - Crystal Structure of A Toluene Tolerance Periplasmic Transport Protein From Neisseria Gonorrhoeae
    Other atoms: Cl (2);
  8. 8dtn (Mg: 4) - The Complex of Nanobody 6101 with BCL11A ZF6
    Other atoms: Zn (4);
  9. 8dtp (Mg: 5) - Close State of T4 Bacteriophage GP41 Hexamer Bound with Single Strand Dna
  10. 8dtw (Mg: 1) - The Crystal Structure of I38T Mutant Pa Endonuclease (2009/H1N1/California) in Complex with Compound SJ001023036
    Other atoms: Mn (2); F (3);
  11. 8du1 (Mg: 2) - Crystal Structure of Nad Bound Dtdp-Glucose 4,6-Dehydratase From Elizabethkingia Anophelis
    Other atoms: Cl (4);
  12. 8due (Mg: 5) - Open State of T4 Bacteriophage GP41 Hexamer Bound with Single Strand Dna
  13. 8duo (Mg: 5) - Dna-Free T4 Bacteriophage GP41 Hexamer
  14. 8dvf (Mg: 5) - T4 Bacteriophage Primosome with Single Strand Dna, State 1
  15. 8dvi (Mg: 5) - T4 Bacteriophage Primosome with Single Strand Dna, State 2
  16. 8dvs (Mg: 1) - Cryo-Em Structure of Rig-I Bound to the End of OHSLR30 (+Atp)
    Other atoms: Zn (1);
  17. 8dvu (Mg: 1) - Cryo-Em Structure of Rig-I Bound to the Internal Sites of OHSLR30 (+Atp)
    Other atoms: Zn (1);
  18. 8dw6 (Mg: 5) - T4 Bacteriophage Primosome with Single-Strand Dna, State 3
    Other atoms: Zn (1);
  19. 8dx0 (Mg: 3) - Vansc Ca Domain
  20. 8dx2 (Mg: 1) - Hiv-1 Reverse Transcriptase/Rilpivirine with Bound Fragment 4-Amino-3- Bromopyridine at Multiple Sites
    Other atoms: Br (5);
  21. 8dx3 (Mg: 1) - Hiv-1 Reverse Transcriptase/Rilpivirine with Bound Fragment 3- Bromobenzylamine in the Thumb Subdomain
    Other atoms: Br (1);
  22. 8dx8 (Mg: 1) - Hiv-1 Reverse Transcriptase/Rilpivirine with Bound Fragment 2-Chloro- 6-Fluorophenethylamine at the 415 Site
    Other atoms: F (1); Cl (1);
  23. 8dxb (Mg: 1) - Hiv-1 Reverse Transcriptase/Rilpivirine with Bound Fragment 5- Fluoroindole-2-Carboxylic Acid at the Nnrti Adjacent Site
    Other atoms: F (2);
  24. 8dxe (Mg: 1) - Hiv-1 Reverse Transcriptase/Rilpivirine with Bound Fragment 2-Amino-6- Fluorobenzonitrile at the Nnrti Adjacent Site
    Other atoms: F (1);
  25. 8dxg (Mg: 1) - Hiv-1 Reverse Transcriptase/Rilpivirine with Bound Fragment 5- (Trifluoromethyl)Pyridin-2-Ol at W24 Site
    Other atoms: F (3);
  26. 8dxh (Mg: 1) - Hiv-1 Reverse Transcriptase/Rilpivirine with Bound Fragment 5- Fluoroquinazolin-4-Ol at W266 Site
    Other atoms: F (1);
  27. 8dxi (Mg: 1) - Hiv-1 Reverse Transcriptase/Rilpivirine with Bound Fragment [1-(4- Fluorophenyl)-5-Methyl-1H-Pyrazol-4-Yl]Methanol at Multiple Sites
    Other atoms: F (2);
  28. 8dxj (Mg: 1) - Hiv-1 Reverse Transcriptase/Rilpivirine with Bound Fragment 1-N- Methyl-4-(Trifluoromethyl)Benzene-1,2-Diamine at the Nnrti Adjacent Site
    Other atoms: F (3);
  29. 8dxk (Mg: 1) - Hiv-1 Reverse Transcriptase/Rilpivirine with Bound Fragment 4- Bromopyrazole at Multiple Sites
    Other atoms: Br (8);
  30. 8dxl (Mg: 1) - Hiv-1 Reverse Transcriptase/Rilpivirine with Bound Fragment 4- Iodopyrazole at Multiple Sites
    Other atoms: I (3);
  31. 8dxm (Mg: 1) - Hiv-1 Reverse Transcriptase/Rilpivirine with Bound Fragment 4- Bromophenol at the Knuckles Site
    Other atoms: Br (1);
  32. 8dy5 (Mg: 1) - Crystal Structure of Spfv CAT2200 Lh in Complex with Il-17A
    Other atoms: Cl (1); Ca (1);
  33. 8dy7 (Mg: 1) - Streptomyces Venezuelae Rnap Transcription Open Promoter Complex with Whia and Whib Transcription Factors
    Other atoms: Zn (3); Fe (4);
  34. 8dy8 (Mg: 1) - Crystal Structure of the R178Q Mutant of Ubiquitin Carboxy Terminal Hydrolase L1 (Uch-L1)
  35. 8dy9 (Mg: 1) - Streptomyces Venezuelae Rnap Unconstrained Open Promoter Complex with Whia and Whib Transcription Factors
    Other atoms: Zn (3); Fe (4);
  36. 8dyo (Mg: 1) - Cryo-Em Structure of Importin-4 Bound to Rangtp
  37. 8dzg (Mg: 6) - Cryo-Em Structure of Bundle-Forming Pilus Extension Atpase From E.Coli in the Presence of Adp
    Other atoms: Zn (6);
  38. 8dzm (Mg: 4) - Crystal Structure of Human SAR1A in Complex with Ppgpp and Magnesium
  39. 8dzo (Mg: 1) - Crystal Structure of Human SAR1T39N Mutant
    Other atoms: Ca (5);
  40. 8dzt (Mg: 2) - Crystal Structure of Human SAR1AH79G Mutant
    Other atoms: Ca (4);
Page generated: Sun Dec 15 11:15:14 2024

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